Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2496 ATGGCAAAACCTAATTGTGGCTCTAAGGTTGGAGCTGTGGATGTGGGAAAATCAAAGGGAAGAATGAAAAAAGGTGTTGAAGTTGTAGATGTTGCTGCAGGATTTCGAATGAAACTAAAGTTTTTGTTTAGTTGCATGGCTTTGAAGCCCAAAGTAGAGGGCTCCTCAAGTGACAACAACAAACAACATGGAAGTAGTTCCTCACATGATAATGGAAGAGAACAAGTTGCTCAAGCAACATCAAACACCAGCCATTCAGCAACTGTTGCTCAATTGACACCCAACTTAAGTGCAGAACTAAGTGCTTATCCCCATTTTCATAACTTCTCCTACAGTGACCTTAGGTTGGCAACAAGGAATTTTAGACGTGAGCATTTTCTTGGTGAGGGTGGATTTGGTAGTGTATTTAAAGGTTGGCTCAGTAACGATGCAATGACTCCAACAAGACCTGGAATGGGGATGCCAGTTGCAGTGAAGGCTCTTAACCAAGATGGACTTCAAGGACATACCGAATGGCTTACTGAACTTAACTACCTTAGCCAGCTTCAGCATCCCAATCTAGTTAAACTAGTTGGCTTTTGCAATGAAGGTGATAAAAGGCTACTTGTATACGAGTTCATGCCACGAGGAAGCTTGGACTCTCATTTGTTTAGGAGATCTGTGCCCTTTCCATGGTCTATCAGAATGAGAATTATGCTTGATGCTGCACAGGGGCTTGCATACCTACACCAAGATGATGATAATAAAAAAGCAGTGATATTTCGAGACTTCAAAACATCCAATGTCCTATTGGATAGGGACTTCAATGCAAAACTTTCCGACTTTGGGCTTGCCAAAGATGGTCCAGTGGGAGATAGAAGCCATGTCGCAACTCGAGTGATGGGAACCCCAGGCTATGCGGCTCCTGAGTACGTGATGACGGGATGTCTTTCTGCCAAGAGTGATGTCTATAGTTTCGGAGTGGTCCTGCTAGAGATGATAACTGGCAGAAAGGTGATTGACAGGCTCAGGCCTTTCGGAGAGAGAAACTTGGTACCATGGGCGTTGCGACAAATAAAGGATGGAGGAAGGTTGTGCCACATGGTGGTGGTGGATCCCAGGCTTCACAGTCAATACTCTAAGAAAGGTGCATTCAAGGCACTAAGGTTGGCTGCACAGTGCGTTTCTCATCACCCTTCAGCAAGACCTGAAATGAGGGATGTGGTTCAAGAGATGAAGCAATTGCCTTCTACGGTGGATGACATGGCTCGTCAAGCGCCACCATCATCATCATCAACAGCATCTCATCATCATGCTATGCAAGTAGCCACATCAAACTCTAACCTTGGTACCGTTAACAAGTATGGCCTCAGAATTGGGTCATCATCAGGGAGTGTACCAAGTCGGTTTCTAGCCTCTCCATGTGATCAGAACTACCCTCTTCCTTCACCCAAGCCAGGGCCTAATGGTGGAAGACCTTGA 1461 0.4531 MAKPNCGSKVGAVDVGKSKGRMKKGVEVVDVAAGFRMKLKFLFSCMALKPKVEGSSSDNNKQHGSSSSHDNGREQVAQATSNTSHSATVAQLTPNLSAELSAYPHFHNFSYSDLRLATRNFRREHFLGEGGFGSVFKGWLSNDAMTPTRPGMGMPVAVKALNQDGLQGHTEWLTELNYLSQLQHPNLVKLVGFCNEGDKRLLVYEFMPRGSLDSHLFRRSVPFPWSIRMRIMLDAAQGLAYLHQDDDNKKAVIFRDFKTSNVLLDRDFNAKLSDFGLAKDGPVGDRSHVATRVMGTPGYAAPEYVMTGCLSAKSDVYSFGVVLLEMITGRKVIDRLRPFGERNLVPWALRQIKDGGRLCHMVVVDPRLHSQYSKKGAFKALRLAAQCVSHHPSARPEMRDVVQEMKQLPSTVDDMARQAPPSSSSTASHHHAMQVATSNSNLGTVNKYGLRIGSSSGSVPSRFLASPCDQNYPLPSPKPGPNGGRP* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2496 486 MobiDBLite consensus disorder prediction 414 440 - -
Dod02g2496 486 Gene3D Phosphorylase Kinase; domain 1 102 206 - -
Dod02g2496 486 Pfam Protein tyrosine and serine/threonine kinase 124 404 IPR001245 GO:0004672|GO:0006468
Dod02g2496 486 PANTHER OS01G0588500 PROTEIN-RELATED 64 441 - -
Dod02g2496 486 ProSitePatterns Protein kinases ATP-binding region signature. 127 159 IPR017441 GO:0005524
Dod02g2496 486 MobiDBLite consensus disorder prediction 416 440 - -
Dod02g2496 486 PANTHER TYROSINE KINASE FAMILY PROTEIN 64 441 - -
Dod02g2496 486 MobiDBLite consensus disorder prediction 53 87 - -
Dod02g2496 486 MobiDBLite consensus disorder prediction 459 486 - -
Dod02g2496 486 Gene3D Transferase(Phosphotransferase) domain 1 207 427 - -
Dod02g2496 486 SUPERFAMILY Protein kinase-like (PK-like) 106 429 IPR011009 -
Dod02g2496 486 MobiDBLite consensus disorder prediction 472 486 - -
Dod02g2496 486 MobiDBLite consensus disorder prediction 52 87 - -
Dod02g2496 486 CDD STKc_IRAK 127 408 - -
Dod02g2496 486 ProSiteProfiles Protein kinase domain profile. 121 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2496 Dod-Chr2 55100716 55105161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2496 43 413 Glycoside Hydrolase AT3G07070 45.383 2.86e-102 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod02g2496 PK_Tyr_Ser-Thr 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2496 - - ahf:112786408 481.485