Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2495 ATGAATGATATCACTATCACTACACCCTTCTTCTTTTCTTCTTGTTCCACCATCATGGCCTTCCCTCCTTCTCACTCTTTCATGTTCCAGACCCATCATCACGAAGACCATCACGACCAGCTTCGTTCAACTTCTACCTCTCTCAACAACAACGCCTTCCCTTCTTTCCCACCCCAACACTTTCAAGGTGCAGCTGCTTCTTTCATGATGAAGAGGTCAATGTCTTTTTCGGGCATAGAGACCAACAACAAGTGCGATGAATCATCACTTCATGTGGACGATGAGTTGTCAGATGATGGGTCCCAGATTGGGGAGCTGAAGAAGAAGAGGCTCAACTTGGAGCAAGTGAAGGCACTTGAGAAGAGCTTCGAGCTTGGCAACAAGCTTGACCCTGAGAGGAAAATGCAGCTTGCTAAGGCCTTAGGCCTTCAGCCGAGGCAGATCGCCATATGGTTCCAGAACAGGAGAGCAAGGTGGAAAACCAAGCAGCTTGAAAAAGAGTATGAGGTGCTTAAGAAGCAGTTCGAAGCTGTTAAGGCCGATAATGATACCCTTAAGGCTCAGAACCAGAAACTACACGCAGAGCTACAAGCTCTGAAAAATAGGGAATGCTGCGAAACCGGAACAATTAGCCTCAAGAAAGAGACTGAGGGTTCTTGGAGCAATGGAAGTGACAACAGCTCAGATATTAACTTGGACATCTCAAGAACACCAGTGATGAAAAGTCCTGTGTCTGCTTCTCAGAATGGTAAGAGCCAGCTTCCACCAACTTCCCTAAAGCCCAACAGCATAACACAGCTCCTCCAATGCTCATCAAGATCAGATCTTCAAGATGAAAGCTTCTCCAACATGTTCCACAACATTGATGGGCAGCAGAATTTTTGGCCCTGGCCTGAGCAGCACCATTTTCATTGA 915 0.4667 MNDITITTPFFFSSCSTIMAFPPSHSFMFQTHHHEDHHDQLRSTSTSLNNNAFPSFPPQHFQGAAASFMMKRSMSFSGIETNNKCDESSLHVDDELSDDGSQIGELKKKRLNLEQVKALEKSFELGNKLDPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYEVLKKQFEAVKADNDTLKAQNQKLHAELQALKNRECCETGTISLKKETEGSWSNGSDNSSDINLDISRTPVMKSPVSASQNGKSQLPPTSLKPNSITQLLQCSSRSDLQDESFSNMFHNIDGQQNFWPWPEQHHFH* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2495 304 ProSiteProfiles 'Homeobox' domain profile. 102 162 IPR001356 GO:0003677
Dod02g2495 304 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 19 304 IPR045224 GO:0003700
Dod02g2495 304 Gene3D - 100 178 - -
Dod02g2495 304 ProSitePatterns 'Homeobox' domain signature. 137 160 IPR017970 GO:0000981|GO:0006355
Dod02g2495 304 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 19 304 - -
Dod02g2495 304 CDD homeodomain 107 163 IPR001356 GO:0003677
Dod02g2495 304 MobiDBLite consensus disorder prediction 240 262 - -
Dod02g2495 304 Pfam Homeobox associated leucine zipper 162 202 IPR003106 GO:0006355|GO:0043565
Dod02g2495 304 SUPERFAMILY Homeodomain-like 107 164 IPR009057 -
Dod02g2495 304 Pfam Homeodomain 108 160 IPR001356 GO:0003677
Dod02g2495 304 Coils Coil 154 202 - -
Dod02g2495 304 PRINTS Lambda-repressor HTH signature 133 142 IPR000047 GO:0003677
Dod02g2495 304 PRINTS Lambda-repressor HTH signature 142 158 IPR000047 GO:0003677
Dod02g2495 304 SMART HOX_1 104 166 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2495 Dod-Chr2 55082613 55085598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2495 14 304 Homeobox Transcription Factor Family AT1G69780 49.511 4.81e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod02g2495 Homeodomain 6.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2495 K09338 - gmx:100790803 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2495 02 55082613 55085598 Dod01g0118 01 2260677 2263200 PCT