Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2480 ATGGAGGAAAGGAATGACATGGATAAGAATATTGATGATGAGATGATGCCTGGTTTCCGGTTTCACCCCACAGATGAGGAGATTGTTGATTTTTACCTCAAGAGAAAAATTCAGCAGAGATCTCTTCCTATTGAATTGATCAAGCAAGTTGATATCTACAAATATGAACCATGGGACCTCCCAAAGCTGACAAGTACTGGGGAGAAAGAGTGGTATTTTTATTGTCCAAGGGACAGGAAATACCGAAACAGTGCAAGACCAAACCGAGTGACAAGAGCTGGGTTTTGGAAGGCCACTGGAACTGATAGACCTATTTACTCCTCAGAGGGAAAGTGCATTGGTTTGAAGAAGTCCCTTGTGTTCTACAGAGGCAGAGCTGCCAAAGGGATGAAAACTGATTGGATGATGCATGAGTTTCGGCTACCTTGTCTATCAGATTCTGCCCCTCCCAAGAAACTCTCAGACAAAAGCATCCCTGCAAGTGATTCATGGGCAATATGTAGGATATTCAAGAAAACCAACTCAATGTCCATGGCACAGAAAGCTTTATCCCACCCTTGGATCTCTCAGTTACCAGGAAGCATGGTATCTGATATGATCACACAGGGTCCAAACTGCAACCAGTTCAGTTCAGAGAACATCTCTTGCACAACAGAAGTAGGATCTTTAGCCATCCAATTCTGTGGCAACAAGCAGCAGCAGGAGTTACACCAAGCCTCTAATAATAACAATGCCAACACAAACTTCTCACCACCTTCAGATATTCCCTCTTATAGGCCAATCAATAGCATCCCAGCTTCCAAGTCCTCACCACAAATTCCTGTCTCGGATGGAGACCTTGCTGACAACTTCATTTTCTACACCCTTGAAGCCACAGGCCCCACCAAGTGCACAGTTGATGGTAGCAGCTCCACGCTTTCCAACCCTGACTACATAGGATTTGATGAAGAGCCAAACCAGCAGCAGTATAGTGGCTTCTCAATTAGTCTACCTCATGATATTCAGCCAAACATGGCCAGAGATACTGTTGTAGAAGAAGAACAAGGGTGGAGAAAGAACCCTTTTCCAGTGCAGCTTAGCCAGTGGGAAACAACAGGAAGGACTATTGGTTTTCCCTTCAGTTTGCCTCCAAATGATGCTTGGAATAAGGCCAGTGTAGCATGGGACTCAACCCCTTGCCCCAGTGAGATGTCCACTAGCTATTCCACTAGTAAATGCTACACTTAA 1227 0.4482 MEERNDMDKNIDDEMMPGFRFHPTDEEIVDFYLKRKIQQRSLPIELIKQVDIYKYEPWDLPKLTSTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSEGKCIGLKKSLVFYRGRAAKGMKTDWMMHEFRLPCLSDSAPPKKLSDKSIPASDSWAICRIFKKTNSMSMAQKALSHPWISQLPGSMVSDMITQGPNCNQFSSENISCTTEVGSLAIQFCGNKQQQELHQASNNNNANTNFSPPSDIPSYRPINSIPASKSSPQIPVSDGDLADNFIFYTLEATGPTKCTVDGSSSTLSNPDYIGFDEEPNQQQYSGFSISLPHDIQPNMARDTVVEEEQGWRKNPFPVQLSQWETTGRTIGFPFSLPPNDAWNKASVAWDSTPCPSEMSTSYSTSKCYT* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2480 408 Gene3D NAC domain 24 177 IPR036093 GO:0003677|GO:0006355
Dod02g2480 408 ProSiteProfiles NAC domain profile. 15 172 IPR003441 GO:0003677|GO:0006355
Dod02g2480 408 SUPERFAMILY NAC domain 14 172 IPR036093 GO:0003677|GO:0006355
Dod02g2480 408 MobiDBLite consensus disorder prediction 241 275 - -
Dod02g2480 408 PANTHER NAC DOMAIN-CONTAINING PROTEIN 94-RELATED 1 406 - -
Dod02g2480 408 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 406 - -
Dod02g2480 408 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2480 Dod-Chr2 54786599 54788613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2480 2 214 NAC Transcription Factor Family AT1G26870 64.977 9.40e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod02g2480 NAM 6.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2480 - - gmx:100777630 564.303