Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod02g2477 | ATGGACATAATCACCGCCGCCACCACCACCACTCCAAAATCTCCAGAACCGGAATCCGAAACACCGACCCGGATCCAACAACCCACAACAAAGCCCTTGTCATTCTCCAACGGTGTCCTCAAGCGCCACCACCCTCCCTCTCATCATCCCTACCACCAACACAACCACCTGGCCAACCCCGCCGCCGTGGCGGTCGTGATATACAAAGAATGCCAGAAAAACCACGCCGCCAGCCTCGGCGGTCACGCCCTTGACGGCTGCGGAGAGTTCATGCCGGCCCCAAGCGCCACCGCCGGCGACCCAACCTCCATCAAGTGCGCCGCCTGCGGCTGCCACCGCAACTTCCACCGCCGCGACAACGACGAGCCACCCTCTCCACTCTCTCCCGTCATCGAGTACCAGCCTCACCACCGCCACCATCCTCCCCCGCCGCCGCCTCCGCCACCCTTCCACCCTCTAAACAACCACCACCATCACCACCACCGGAGCCCTAGCTCGGCCTCCCCACCTCCTATCTCCTCGTCGTACTACCCTTCCGCCCCTCACATGCTCCTCGCCCTCTCCTCCGGAGGCGGCCTCTCCGTCCCTCCGGAAAACACCGCCGCCCCCGCCTCCACCAACCACCCGTTAGCCACCTCACGAAAACGGTTCAGGACCAAGTTCACTCCAGAACAGAAGGAGAAAATGCTCCGCTTCGCTGAACGCGTTGGTTGGAAGATGCAGAAGAGAGATGAGGATCTCGTTCAGGAGTTTTGCCATGAAGTCGGCGTCGATCGTGGGGTTCTCAAGGTTTGGATGCACAACAACAAGAACACTTTCGGGAAACGAGATAATAACGACCTTGCTGCTACTCCTCCTGGTGCTGATGCAAATAATGCTAATGCTAATGTTAATGCTGTTACTGCTAGGAATGTTCTGGAACAAATCCCTATTAACAACAACGATAACATTAACGGTAACGGTCTTAACGGTGAGATCAATGGCGGTGAGGGGAGCGGCAACGATGATGGTGTTGGGAACAGGGATGATGATGATAGCGGCGCCAACGGTGGTGGCACTAATGGGTCGTCTTCTTCTTCTTGA | 1083 | 0.5762 | MDIITAATTTTPKSPEPESETPTRIQQPTTKPLSFSNGVLKRHHPPSHHPYHQHNHLANPAAVAVVIYKECQKNHAASLGGHALDGCGEFMPAPSATAGDPTSIKCAACGCHRNFHRRDNDEPPSPLSPVIEYQPHHRHHPPPPPPPPPFHPLNNHHHHHHRSPSSASPPPISSSYYPSAPHMLLALSSGGGLSVPPENTAAPASTNHPLATSRKRFRTKFTPEQKEKMLRFAERVGWKMQKRDEDLVQEFCHEVGVDRGVLKVWMHNNKNTFGKRDNNDLAATPPGADANNANANVNAVTARNVLEQIPINNNDNINGNGLNGEINGGEGSGNDDGVGNRDDDDSGANGGGTNGSSSSS* | 361 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod02g2477 | 360 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 6 | 299 | - | - | |
Dod02g2477 | 360 | MobiDBLite | consensus disorder prediction | 311 | 360 | - | - | |
Dod02g2477 | 360 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 68 | 119 | IPR006456 | - | |
Dod02g2477 | 360 | Gene3D | - | 201 | 274 | - | - | |
Dod02g2477 | 360 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 68 | 119 | IPR006456 | - | |
Dod02g2477 | 360 | MobiDBLite | consensus disorder prediction | 188 | 215 | - | - | |
Dod02g2477 | 360 | PANTHER | HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN | 6 | 299 | - | - | |
Dod02g2477 | 360 | MobiDBLite | consensus disorder prediction | 116 | 175 | - | - | |
Dod02g2477 | 360 | SUPERFAMILY | Homeodomain-like | 205 | 275 | IPR009057 | - | |
Dod02g2477 | 360 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Dod02g2477 | 360 | MobiDBLite | consensus disorder prediction | 311 | 327 | - | - | |
Dod02g2477 | 360 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Dod02g2477 | 360 | Pfam | ZF-HD protein dimerisation region | 66 | 120 | IPR006456 | - | |
Dod02g2477 | 360 | MobiDBLite | consensus disorder prediction | 193 | 212 | - | - | |
Dod02g2477 | 360 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 214 | 271 | IPR006455 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod02g2477 | Dod-Chr2 | 54686878 | 54688265 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod02g2477 | 1 | 270 | ZF-HD Transcription Factor Family | AT5G15210 | 50.909 | 1.25e-76 | 235 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | zf-HD | Dod02g2477 | ZF-HD_dimer | 4.8e-28 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod02g2477 | - | - | ahf:112783874 | 350.517 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod02g2477 | 02 | 54686878 | 54688265 | Dod01g0129 | 01 | 2483621 | 2484334 | PCT |