Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2465 ATGGAGAACGTTTCCAGACCCATGAATGAAGACCACAAGTTTGAATTGCCACCGGGTTTTAGGTTCCATCCAACAGATGAAGAGCTCATATCTCACTACCTCTCCCAGAAGGTTCTTAACAGCTGCTTCTGGGCTAGAGCCATTGGAGAGGTTGATTTAAACAAGTGTGAGCCATGGGATTTGCCTGGGAGGGCCAAAATGGGCGAGAAAGAGTGGTATTTTTTCTGTGTGAGGGACAAAAAGTACCCAACTGGTCTAAGGACAAATAGGGCCACTGGTGCTGGCTACTGGAAGGCCACAGGCAAAGACAAAGAGATATACAAGGTAAAAGCACTGATTGGAATGAAGAAAACTCTTGTTTTCTACAGAGGAAGAGCTCCAAAAGGTGAGAAGACAAATTGGGTCATGCATGAGTACAGGTTGGAGGGGAAACATTCAGTGTACAATCTACCCAGAACAGCTAAGAATGAGTGGTCACTATGCAGAGTTTTTCACAAGAGTGAAAAGAAATTGCATGTTCAAGCAGGGTTGGTGAATTTCAGCTCCTCTGGAAAGGAACTGCCTCCACTGATGGATTCTTCGCCATACAACAGCGAAACAAGAACTGCTGGTGGGGAGTCATCACACGTGACCTGCTTCTCCGATCCAAATCAAACAGATGACCAAAGGACACAGCATGATGACATAGTTGATAGCCTTGAAACAGCTCCTATGTTGGCACCTTCATCACATGCTTCAAATCCAAACCCCTCTGTTATTTACCCTGCCTCATGGAATTTTACCAAATCTGCCCCTACTGTGTCCCACCAACAATCCACACAAATTGCACAGGAAGTTGGGAACTCATCACAGTGCCTAGATTATTTTGCCACACAAGATCAGGCCATGTTGAGGATGTTGATTGAATCAGGTACGAAGCCAAAGAATCAGAAAGCCGAGGGTAGATACCACTTTGATGCTGACATATCCTCTGTGATGTTGTACAACAATGAAATGTTTCAGAGATCATTTGGGAATCAGGAATATTCATCAGCTTCTGTAGGAGGACATGTGGACGGTGCTTATTGCCTATGGAATTTCTAG 1083 0.4469 MENVSRPMNEDHKFELPPGFRFHPTDEELISHYLSQKVLNSCFWARAIGEVDLNKCEPWDLPGRAKMGEKEWYFFCVRDKKYPTGLRTNRATGAGYWKATGKDKEIYKVKALIGMKKTLVFYRGRAPKGEKTNWVMHEYRLEGKHSVYNLPRTAKNEWSLCRVFHKSEKKLHVQAGLVNFSSSGKELPPLMDSSPYNSETRTAGGESSHVTCFSDPNQTDDQRTQHDDIVDSLETAPMLAPSSHASNPNPSVIYPASWNFTKSAPTVSHQQSTQIAQEVGNSSQCLDYFATQDQAMLRMLIESGTKPKNQKAEGRYHFDADISSVMLYNNEMFQRSFGNQEYSSASVGGHVDGAYCLWNF* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2465 360 MobiDBLite consensus disorder prediction 193 219 - -
Dod02g2465 360 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Dod02g2465 360 MobiDBLite consensus disorder prediction 184 224 - -
Dod02g2465 360 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Dod02g2465 360 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Dod02g2465 360 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 8 344 - -
Dod02g2465 360 Gene3D NAC domain 25 171 IPR036093 GO:0003677|GO:0006355
Dod02g2465 360 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2465 Dod-Chr2 54262784 54264762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2465 14 360 NAC Transcription Factor Family AT5G07680 51.268 4.61e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod02g2465 NAM 3.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2465 - - gmx:100781383 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1751 05 42939033 42941125 Dod02g2465 02 54262784 54264762 ECH
Dod02g2465 02 54262784 54264762 Dod02g2465 02 54262784 54264762 ECH