Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2464 ATGGGACGATCACCATGCTGCGACAAGGTTGGCTTAAAGAAAGGACCATGGACTCCAGAGGAGGATCAGAAACTCTTAGCTTACATTGAAGAACATGGCCATGGAAGCTGGCGTGCTTTGCCAGCAAAAGCTGGACTTCAGAGGTGTGGCAAGAGCTGCAGACTGAGATGGACTAATTATCTTAGGCCTGATATTAAGAGGGGAAAGTTCAGTTTGCAAGAAGAGCAAACCATCATTCAACTCCATGCCCTCTTAGGGAACAGGTGGTCGGCTATAGCAACACACTTGCCAAAGAGGACAGATAATGAGATCAAGAACTACTGGAACACGCATCTTAAGAAGAGGTTAACTAAGATGGGAATCGACCCTGTGACCCACAAGCCCAAAAACGATGCACTCCTCTCCAGTGATGGCCAATCCAACAAAACTGCTGCAAACCTCAGCCACATAGCTCAGTGGGAGAGTGCTCGCCTTGAAGCCGAGGCAAGGCTCGTTAGGGAATCAAAGCTTCGCTCACAATCACATAACTCCCTGAATCAACTTGCAAGTTCTTCATCTTCTGCATTAAATTCAGCTCCAGTTCTCAACAACAAGAAGCCAGAATCAGCATCAGCATCAGCATTATTACCACCACCTATTCCGTCACATTCCCTTGATGTGTTAAAGGCTTGGAGTAATGGAGGGTGGTTGAAATCTTCCAGTGAAGGGAATAATAATGGTGGAAATGGAATTGGTGGGGACCTTGAGTCACCTACATCTACCTTATCTTTCTCTGAGAATGCACCACCAATTATGGTTAGTGGAGTTGTTGGGGGAGATAATCAGAACAATGCAGTGGTGGTGGTGCCTAGTGTTATTGAGTTTGTGGGGAGCTCAGGTTCTTGTGAGACAGGAGGGGTTGTGAAGGAAGAGGGTGATGGTGACCAAGATCAGTGGAAAGTAGGGTATGATGAGAGTTCAATGGCTTTCACATCCGGACTTAATGAGTTGACAATGTCAATGGAAGGGACATGGGGGCCTCATCATCATGAGTCCCTTAGAACTAGTGCTTGTGGCTCTCATGTTGAAGGTGGTGATGCCAATAATATTGTTGAGGAAGGGTTCACCAATCTTCTGCTCAATGCACACTCTGATGATAGGATGAGTTTGTCTGAAGGTGGGGGAGAATCTAACAATGGTGATGGCACCAGTGGCAGTGGCAGTGATTTCTATGAAGATAACAAAAACTACTGGAACAGCATTCTTAATTTAGTGAATTCTTCACCTTCTGATTCCCCAATGTTCTGA 1287 0.4584 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPKNDALLSSDGQSNKTAANLSHIAQWESARLEAEARLVRESKLRSQSHNSLNQLASSSSSALNSAPVLNNKKPESASASALLPPPIPSHSLDVLKAWSNGGWLKSSSEGNNNGGNGIGGDLESPTSTLSFSENAPPIMVSGVVGGDNQNNAVVVVPSVIEFVGSSGSCETGGVVKEEGDGDQDQWKVGYDESSMAFTSGLNELTMSMEGTWGPHHHESLRTSACGSHVEGGDANNIVEEGFTNLLLNAHSDDRMSLSEGGGESNNGDGTSGSGSDFYEDNKNYWNSILNLVNSSPSDSPMF* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2464 428 Gene3D - 13 66 - -
Dod02g2464 428 CDD SANT 69 112 IPR001005 -
Dod02g2464 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Dod02g2464 428 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dod02g2464 428 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Dod02g2464 428 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dod02g2464 428 MobiDBLite consensus disorder prediction 384 401 - -
Dod02g2464 428 CDD SANT 16 61 IPR001005 -
Dod02g2464 428 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Dod02g2464 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Dod02g2464 428 MobiDBLite consensus disorder prediction 379 401 - -
Dod02g2464 428 MobiDBLite consensus disorder prediction 169 211 - -
Dod02g2464 428 SMART sant 66 114 IPR001005 -
Dod02g2464 428 SMART sant 13 63 IPR001005 -
Dod02g2464 428 MobiDBLite consensus disorder prediction 232 256 - -
Dod02g2464 428 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dod02g2464 428 PANTHER TRANSCRIPTION FACTOR MYB106 1 421 - -
Dod02g2464 428 MobiDBLite consensus disorder prediction 120 140 - -
Dod02g2464 428 Gene3D - 69 116 - -
Dod02g2464 428 MobiDBLite consensus disorder prediction 171 203 - -
Dod02g2464 428 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2464 Dod-Chr2 54232217 54235148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2464 1 428 MYB Transcription Factor Family AT3G01140 53.793 9.86e-127 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod02g2464 Myb_DNA-binding 1.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2464 K09422 - gmx:100101835 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1113 04 31693535 31695465 Dod02g2464 02 54232217 54235148 ECH
Dod02g2464 02 54232217 54235148 Dod02g2464 02 54232217 54235148 ECH