Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2458 ATGCCTATGAGAGCAGGCTTGAACAGATGCCGCAAAAGTTGTAGACTGCCGTGGTTGAATTATCTAAAACCAGATATCAAGCTGGGAAAGTTCACTGAGGATGAAGTTGATCTCACGATTAGAATGCATAGACTTTTGGGAAACAGATGGTCCCTGATTGCTGGAAGACTTCCGGGGAGAACTGCGAACGATGTGAGAAACTATTGGAACACTAATGTTCGTAAGAAGCTATCATCATCCATAATTCCAAAGGAAGAAGACACCAATAACATTACTGATGCAAAGCCAAAGGGAACTGCAGTGACAGCAATGAGGCCTAACGAAGCTATAAAACTCCAACCTCGGACTTTCTCAACAATGACTTCTTCGCCATGGTCGAGAAACGGGTTCCTTATTGGTCCCCATCATCAGCAGGATCATGATGATGATGATGAGAACAATAATGGGGCCAAGGAGCTCACTGTTGATGCATGTGCAGCTTCACCATCAGGGTGTAACAAGAGTTGGCTGGGAGATGAGTGGTGGGGAACCGTGTTGGAAGACAAAGGAGGCAACTCGGAGAACGACCCGTGCTACTTTGTTGGTGATGATCAGCAATATGGGAAGCCCTTGACGGACTCGGCCAGTTGGAATGAAGGGCTTGCTACTGAAGCTGATGATGATGGCGAGTTACTTATACAAGGTCAAAGTTGGAGTGATCTTCTTCTTGACACCAATTTGTGGGATTTTGTACATCAGATGTAG 744 0.457 MPMRAGLNRCRKSCRLPWLNYLKPDIKLGKFTEDEVDLTIRMHRLLGNRWSLIAGRLPGRTANDVRNYWNTNVRKKLSSSIIPKEEDTNNITDAKPKGTAVTAMRPNEAIKLQPRTFSTMTSSPWSRNGFLIGPHHQQDHDDDDENNNGAKELTVDACAASPSGCNKSWLGDEWWGTVLEDKGGNSENDPCYFVGDDQQYGKPLTDSASWNEGLATEADDDGELLIQGQSWSDLLLDTNLWDFVHQM* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2458 247 SUPERFAMILY Homeodomain-like 8 81 IPR009057 -
Dod02g2458 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 77 IPR017930 -
Dod02g2458 247 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 125 - -
Dod02g2458 247 SMART sant 27 75 IPR001005 -
Dod02g2458 247 Gene3D - 30 99 - -
Dod02g2458 247 CDD SANT 30 73 IPR001005 -
Dod02g2458 247 Pfam Myb-like DNA-binding domain 29 71 IPR001005 -
Dod02g2458 247 ProSiteProfiles Myb-like domain profile. 23 73 IPR001005 -
Dod02g2458 247 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 1 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2458 Dod-Chr2 54073378 54076947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2458 1 122 MYB Transcription Factor Family AT1G66370 57.377 1.49e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod02g2458 Myb_DNA-binding 5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2458 - K09422 gmx:100306270 209.534