Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2454 ATGGAAGCTACAGCTTCAGCTTCTGTGATCATAACTGTGTCACATGATGGAAAGGGACACTACCGGACGGTGCAGGAAGCCATTGATGTGGTGCCACTCGGCAACACTCGCCGGACGGTGATCCGGGTGTTGCCCGGAATCTACAAGCAGCCCTTCTATGTTGCCAAGACCAAGAGGTTCATCACACTCTCTGGAACTTGCCCTGAGGACACTGTTCTCACCTGGAGCAACACTGCCACCAAAATTCAACATCACCAAGGTGATCGAGTGATAGGCACTGGCACGTTTGGTTGTGGCAGCACCATTGTGGAAGGGGATGACTTTATTGCTGAAAATATCACGTTTGAGAATTCTTCCCCTCAGGGTTCAGGGCAAGCAGTGGCAATTAGAGTGACAGCTGATCGATGTGCCTTCTACAATTGTAGGTTCCTTGGATGGCAGGACACGCTGTATTTACATTCTGGCAAACAGTATCTGAAAGATTGTTACATCGAAGGAAGTGTGGACTTCATTTTTGGTAATAGCACTGCCCTCTTGGAGCACTGTCATATCCACTGCAAATCTGGAGGGTTCATAACAGCACACGGCAGAAAATCTCCACATGAAACAACTGGTTTTGTATTCCTAAGATGTGTTATCACAGGCAATGGAGGAACTTCGTATGTATATCTTGGACGACCATGGGGACCTTTTGCAAGAGTGGTCTTTGCATTCACTTTTATGGATCCTTGTATAAAGCATGTTGGCTGGAATAATTGGGGAAAAACTGAGAATGAGAAAACTGCTTGCTTTTATGAATACAGGTATCTCTTATCAGATTCCAGTTTATACTGTTTTTAA 840 0.4548 MEATASASVIITVSHDGKGHYRTVQEAIDVVPLGNTRRTVIRVLPGIYKQPFYVAKTKRFITLSGTCPEDTVLTWSNTATKIQHHQGDRVIGTGTFGCGSTIVEGDDFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHSGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSGGFITAHGRKSPHETTGFVFLRCVITGNGGTSYVYLGRPWGPFARVVFAFTFMDPCIKHVGWNNWGKTENEKTACFYEYRYLLSDSSLYCF* 280
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2454 279 ProSitePatterns Pectinesterase signature 2. 164 173 IPR033131 -
Dod02g2454 279 Pfam Pectinesterase 11 268 IPR000070 GO:0030599|GO:0042545
Dod02g2454 279 Gene3D - 5 274 IPR012334 -
Dod02g2454 279 PANTHER PECTINESTERASE 7 269 - -
Dod02g2454 279 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 269 - -
Dod02g2454 279 SUPERFAMILY Pectin lyase-like 5 269 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dod02g2454 Dod-Chr2 53976500 53979519 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2454 6 265 Carbohydrate Esterase AT5G47500 37.687 2.01e-60 194