Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2446 ATGGGTTGCATCAACTCCAAGAATGCAGTTTCAGGAGCCTATTCTCCTTCGCCAGAAGCCAATTCCCATGTTGTGGTGGATGCTCTTCCTCATTGTCCTTCCGTGGATTTTGTTGACCACAATAAGGGGGCATTGTCAATGATAACAACAACAGAGGATAACAAGAAGAAGCTGAAGAAGATCAACTCCAGAAAGAGCACTAGCTCCTTCAGCTTCAGGCTTGGATTCTCACGCAGGCATGTGGATGCTGAACAGAATGCTGCTGGTTGGCCAAGTTGGCTCACAGCTGCTGCTGCTGAAGCTATTCATGGATGGGTCCCCCTTAGAGCTGATTCTTTCCAGAAGTTGGATAAGATTGGACAAGGTACATATAGCAGTGTATTCCGAGCACGTGAAGTTGAAAGTGGGAGGGTGTTTGCTCTGAAGAAGGTGCACTTTGACAATCATCAACCTGAGAGTATTAGGTTCATGGCAAGAGAAATAACAATCCTCCGTAGGCTTGACCACCCAAACATCATGAAATTGGAGGGTATAATCACCTCCCGGCTATCGAGTAGCATATACCTTGTATTTGAATACATGGAGCATGATCTTGCTGGCCTAGTATCGCATCCTGATGTCATGTTCACCGACTCACAGATAAAATGTTACATGAGGCAGCTATTAAGTGGACTTGAGCACTGTCATATCCGTGGCATTATGCATCGAGACATTAAAGTATCAAATATCTTATTGAATAATGAAGGTGTTCTCAAGATAGGAGATTTTGGATTAGCAAATACGCTTATCTCGAATAACAAGCATCAGTTAACCAGTCGTGTAGTAACTCTATGGTATCGTCCTCCTGAGCTATTGATGGGAGCAACCAATTATGGAGTGTCAGTGGATCTATGGAGTGTGGGTTGTGTATTTGCAGAACTTTTTCTGGGGAAACCTATCCTCAAGGGAAGAACTGAGGTTGAACAACTACACAAAATTTTTAAGCTTTGTGGTTCTCCGCCTGATGAGTTCTGGAAAAAGTATAAGCTTCCTCATGCAATGTTTAAACCTCAGACTAATTATGAAAGCTCTCTTCGGGAGAGGTGTCTAGAGTTCCCTCCAGCTGCTGTTGACCTACTTGAGAATTTACTATCCATTGACCCTGTCAAGCGTGGGACTGCCTCCTCTGCCCTGATGTCTGAGTATTTCAACACCAAGCCTTATGCTTGCAATCCATCAAGTCTGCCAAAGTATCCGCCTAGCAAAGAAATGGATGCTAAAAATCGGGAAGACATGTCCAGAAAGAGGACTGGAGATAAAATGCGAGAGGCTGCAACATCAAGAAGGCAGCCAAGACGAGCCACTAAATTTATGCGAGAACAAATAGATTACAGTAAATCAATTTCAAAAGAGAACATTGCATATAGAGATGATGGTAAAGCACATCCCACAAAGGGAAAGAGAGGATCTATTCCTAAAGCCCATGTAAAGCCTTCATTAGATGCAATGTCGGAGGCTTCGCAGATGGTGAATGTTGCTGATAATAATGGCTATAGCGTACCGATACAAGTCCAAGGATCTAGTGCCTTTGCATGGGTAAAAAGGAGAAAACCAGATGCTTCATCCACACTATCAGATGGCTCAAGAAGCAAAATTAGTGCACTGGATCCAAACTTTGCAAAAGGCACATATGATTTATCCAAACAAAGGAAATATAACGACAAACTAGGTCACCAGGATAAGACTTGTGTATCCATGGATTTTGATCCTGCAGAACTGGGCCACGAAGAACAAGGTTCGCATTGGAATGAAAACATTGTGCGGCACACAGCTCGTAAATCAAGGTTTGGAAGAGCTGGCATCAACCATTTTAACTTCTGA 1860 0.4323 MGCINSKNAVSGAYSPSPEANSHVVVDALPHCPSVDFVDHNKGALSMITTTEDNKKKLKKINSRKSTSSFSFRLGFSRRHVDAEQNAAGWPSWLTAAAAEAIHGWVPLRADSFQKLDKIGQGTYSSVFRAREVESGRVFALKKVHFDNHQPESIRFMAREITILRRLDHPNIMKLEGIITSRLSSSIYLVFEYMEHDLAGLVSHPDVMFTDSQIKCYMRQLLSGLEHCHIRGIMHRDIKVSNILLNNEGVLKIGDFGLANTLISNNKHQLTSRVVTLWYRPPELLMGATNYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLHKIFKLCGSPPDEFWKKYKLPHAMFKPQTNYESSLRERCLEFPPAAVDLLENLLSIDPVKRGTASSALMSEYFNTKPYACNPSSLPKYPPSKEMDAKNREDMSRKRTGDKMREAATSRRQPRRATKFMREQIDYSKSISKENIAYRDDGKAHPTKGKRGSIPKAHVKPSLDAMSEASQMVNVADNNGYSVPIQVQGSSAFAWVKRRKPDASSTLSDGSRSKISALDPNFAKGTYDLSKQRKYNDKLGHQDKTCVSMDFDPAELGHEEQGSHWNENIVRHTARKSRFGRAGINHFNF* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2446 619 PANTHER CELL DIVISION PROTEIN KINASE 1 593 - -
Dod02g2446 619 SMART serkin_6 113 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2446 619 MobiDBLite consensus disorder prediction 464 478 - -
Dod02g2446 619 Gene3D Transferase(Phosphotransferase) domain 1 196 436 - -
Dod02g2446 619 ProSiteProfiles Protein kinase domain profile. 113 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2446 619 Pfam Protein kinase domain 113 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2446 619 PANTHER CYCLIN-DEPENDENT KINASE 1 593 - -
Dod02g2446 619 CDD STKc_CDK9_like 113 396 - -
Dod02g2446 619 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Dod02g2446 619 MobiDBLite consensus disorder prediction 464 487 - -
Dod02g2446 619 MobiDBLite consensus disorder prediction 406 447 - -
Dod02g2446 619 SUPERFAMILY Protein kinase-like (PK-like) 106 401 IPR011009 -
Dod02g2446 619 Gene3D Phosphorylase Kinase; domain 1 100 195 - -
Dod02g2446 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Dod02g2446 619 MobiDBLite consensus disorder prediction 415 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2446 Dod-Chr2 53815396 53821795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2446 105 443 Core Cell Cycle Gene Families AT5G10270 45.915 4.42e-105 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod02g2446 Pkinase 2.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2446 - - gmx:100790917 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1764 05 43055032 43060483 Dod02g2446 02 53815396 53821795 ECH
Dod02g2446 02 53815396 53821795 Dod02g2446 02 53815396 53821795 ECH