Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2444 ATGACAGTGAGCCAAACCCAAAGAGAAGGCAAGAACACTAATCCCGGCGTTTCTGAAGTACATCAAAGGACTGTCACAGAGTCCAAAATCATTGTGCAAACGAGAAGCAAAGTTGATCTTTTGGATGATGGCTACAGGTGGCGCAAGTATGGGCAGAAAGTGGTAAAGGGTAATCCTCATCCAAGGAGCTATTACAAATGCACTAGTGCAGGATGCAGCGTGAGAAAGCATGTTGAGAGGGCTTCAGCGGATCCAAAAGCTGTCATAACAACTTACGAGGGAAAACATAACCATGATGTCCCTGCATCTAGAAACAGCAGCCAGAACACTGCTGCTAGCGCCTCAATGCCTCTAAAGCCACATAATGTGGTTCCTGAAAAGCATCCTTTGCTTAAAGACATGGATTTTGGAAGTAACGACCAAAGACCAATACATTTGCGATTGAAGGAAGAGCAAATCATAGTATAA 468 0.4423 MTVSQTQREGKNTNPGVSEVHQRTVTESKIIVQTRSKVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCSVRKHVERASADPKAVITTYEGKHNHDVPASRNSSQNTAASASMPLKPHNVVPEKHPLLKDMDFGSNDQRPIHLRLKEEQIIV* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2444 155 Pfam WRKY DNA -binding domain 42 99 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g2444 155 MobiDBLite consensus disorder prediction 1 26 - -
Dod02g2444 155 PANTHER WRKY TRANSCRIPTION FACTOR 73 16 153 - -
Dod02g2444 155 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 153 IPR044810 GO:0003700
Dod02g2444 155 MobiDBLite consensus disorder prediction 93 121 - -
Dod02g2444 155 SMART WRKY_cls 41 100 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g2444 155 MobiDBLite consensus disorder prediction 101 116 - -
Dod02g2444 155 Gene3D WRKY domain 25 102 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod02g2444 155 ProSiteProfiles WRKY domain profile. 36 101 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g2444 155 SUPERFAMILY WRKY DNA-binding domain 33 101 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2444 Dod-Chr2 53796167 53797791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2444 23 153 WRKY Transcription Factor Family AT2G03340 64.394 7.14e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod02g2444 WRKY 1.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2444 - - gmx:100170684 268.855