Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2443 ATGTCCACCACCACCCACCGCCACTCCGCCACGGCGCCGCCACCGCCCACCATTGCCCTGCCGCCGCGGCCTTCCCTCGACTCCTTCTTCTCGTCCGCCGGCATAAGCCCTGGCCCCATGACACTGGTCTCCTCCTTCTTCGCCGACGACTCCCCTTCATTCTCTCAGCTCCTCGCCGGCGCCATGGCCTCTCCACTCGCCTTCCCTCCACCCTCCAAGGAACCAAATCATCATCATGATGATCATGATGGTGATGGTGGTGATGACCATGATGATGGGTCTCACACTCAATACTCTCCCAAGAAAATTGTTGTTGGTGTTGGTAATGGTGGTGGTGGTGGGTTTAAGCAGAGTAGGCCAATGAACTTGGTGGTTGCGCGTTCTCCGCTTTTCACCGTGCCACCTGGCTTGAGTCCTTCTGGTTTCCTCAACTCCCCTGGCTTCTTCTCCCTCTCCCCACAGAGCCCCTTTGGGATGTCCCACCAGCAGGCTTTAGCACAGGTTACGGCTCAAGCTGTGCTAGCACAATCACATATTCAAATGCAAGCTGATTATCAGCCGCCTGCCTTAACAGCCGTGGATGAATCATTGGACCACAATCTACCCTTTACTCAGAATGATGCTGCAGACAAGAATTTGGCACCATATGTATCAGAAACTCAAAGTGCTCAACTGGAAGCATCGGAGATAACTCATGTTGATAAGAAATTTCAACAGCCTTCTCTTGCCATTGACAAACCTGCGGATGATGGCTACAACTGGCGTAAGTATGGACAGAAGCAGGTTAAAGGGAGTGAGTATCCGCGGAGCTACTACAAATGTACACATCTGAATTGCCCTGTGAAGAAAAAAGTTGAGCGTGCCCTGGATGCTCATATCACTGAAATTATCTATAAAGGGCAGCATAACCACAAAAAGCCTCAGGCGAATAGGCGTACTAAAGATAACAATGATTCAAATGAAAATGCAGCAAGCATTCAACCTAAGTCTGAGTCAAATTCACAAGGTTGGGTTGGAAATTCGAACAATTCAGGTGAAAGCTTGCCTGATTGTTCAATGCTGGAGGGTGATCAGGCCTTCAATCAAGGGGCTCCCAGGCAACTACCTGGATCAAGCTGA 1119 0.5049 MSTTTHRHSATAPPPPTIALPPRPSLDSFFSSAGISPGPMTLVSSFFADDSPSFSQLLAGAMASPLAFPPPSKEPNHHHDDHDGDGGDDHDDGSHTQYSPKKIVVGVGNGGGGGFKQSRPMNLVVARSPLFTVPPGLSPSGFLNSPGFFSLSPQSPFGMSHQQALAQVTAQAVLAQSHIQMQADYQPPALTAVDESLDHNLPFTQNDAADKNLAPYVSETQSAQLEASEITHVDKKFQQPSLAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERALDAHITEIIYKGQHNHKKPQANRRTKDNNDSNENAASIQPKSESNSQGWVGNSNNSGESLPDCSMLEGDQAFNQGAPRQLPGSS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2443 372 MobiDBLite consensus disorder prediction 73 97 - -
Dod02g2443 372 SUPERFAMILY WRKY DNA-binding domain 247 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod02g2443 372 SMART WRKY_cls 248 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g2443 372 MobiDBLite consensus disorder prediction 62 105 - -
Dod02g2443 372 Pfam WRKY DNA -binding domain 249 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g2443 372 PANTHER WRKY PROTEIN 11 372 - -
Dod02g2443 372 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 11 372 IPR044810 GO:0003700
Dod02g2443 372 MobiDBLite consensus disorder prediction 319 349 - -
Dod02g2443 372 MobiDBLite consensus disorder prediction 299 372 - -
Dod02g2443 372 ProSiteProfiles WRKY domain profile. 243 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g2443 372 MobiDBLite consensus disorder prediction 1 34 - -
Dod02g2443 372 Gene3D WRKY domain 235 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2443 Dod-Chr2 53793560 53796122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2443 9 326 WRKY Transcription Factor Family AT2G03340 48.024 2.94e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod02g2443 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2443 - - gmx:100796679 437.958