Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2436 ATGGCGGCGGCGAAACCCCAGAGGACTCCACAGGAAGTGGAGGACATAATCATCCGCAAAATCTTCCTCGTTTCGATCACCGATTCCGAAGCAAACAACGCCGATTCGAGAATCGTGTACCTTGAACTTACGGCTGCGGAGATTCTCAGCGAAGGGATGGACCTCCGCCTCTCGCGCGATACGATGGAGAGGATTCTCATCGATCGACTCAACGGCGATTTCTCCGCCGCGGCCGGAGCCGGAGAATCGCCGTTCCAGTACCTCCTCGGTTGCTGCCACCGCGCGCACGAAGAATCGAAGAAAATCGCAAACATGAAAGACAAAACCCTGAAGTCTGAGATGGAAGCAGTGGTGAAACAGGCCAAGAAGCTCTGCGTCTCGTACTGCAGGATCCACCTAGCGAATCCGGACATCTTTCCGAACCGGAATCCTTCATCCGGTTCGGGTTCCGCATCGTCGCCGCTGCTGCCGCTGATCTTTGCGGAGGTTGGCGGCGGCATCGACGCCTTCGGCGGTAGCAGCGGTGGAGGGGCGAAGAGTCCGCCGGGGTTCTTGGAGGAGTTCTTCAGGGACTCTGATTTTGACAGCCTGGACCCAATTCTGAAGGGACTGTATGAGGAGCTGAGAGGGAGCGTGATGAAGGTGTCCGCTCTTGGGAACTTTCAGGACTCTCTGAGGGCTTTGCTTTTCTTGGTGAGGTTCCCCATTGGTGCGAAGTCACTTGTGAACCATGAATGGTGGATTCCCAAAGGTGTTTACATGAACGGGCGTGCCATTGAGATGACCAGCATTTTGGGTCCCTTCTTCCACGTCAGTGCTCTCCCTGATCAGACCTTCTTCAGAAGCCATCCTGACGTTGGGCAGCAGTGCTTTTCTGATGCATCAACTCGACGACCATCTGATTTATTATCATCATTCTCCACTATCAAAACTGTCATGAACAACTTATACGATGGCCTATACGAAGTTCTCTTCATTCTCCTGAAAAGTAAAGATACTCGTGAAAAGGTACTTGAGTATCTTGCGGAGGTGATCAATATAAATGCATCCAGGGCTCATATACAGGTTGATCCTATAACTTGTGCAAGTTCAGGCATGTTTGTAAATCTTAGTGCTGTCATGCTTCGTCTCTGTGAGCCATTTTTGGATGCAAATCTAACCAAAAGGGATAAAATTGATTCAAAATATGTACACTACTCAAACCGTTTGAAGCTAAGTGGGTTGACTGCTCTTCATGCATCGTCAGAAGAAGTTGCTGAATGGCTTAATAGTAATAAATGGGTTAAGGCTGGTGAAAATAATCAAAGTAATGATGATCAGAAACGCTTGCAGCAATCTCAAGAAGCCAGCAGTTCTGGTAGTACTAGTGCTGGTGAGCTTTCGAATAAAAATTCTGGACATGGTGAAAAGACGGAATATCATTTTATTTGCGAATGCTTCTTTATGACTGCAAGAGTGCTCAACTTGGGCCTCTTAAAAGCATTTTCTGACTTCAAACACTTAGTTCAGGATATTTCTAGGTGTGAAGATGCTCTTTCAACACTCAGATCCATGCAGGAGCGGTCTCCCACTCCTCAGGCGGAATTGGATATATCTCGACTAGAGAAAGAATTGGAATCATACTCCCAGGAAAAGCTTTGTTATGAAGCTCAGATATTGAGGGATAACACACTTATTCAGAATGCACTGTCCTTATACCGCTTGATGATTGTTCGGTTGGTTGGCTTGGTTGGGGGATTTAAGATGCCTCTACCATCAACTTGCCCAATGGAATTTGCTACTATGCCTGAGCATTTTGTAGAAGATGCCATGGAACTTCTGATATTTGCTTCCCGTATTCCAAAAGCCTTAGATGGAGTTGTGCTGGATGAGTTTATGAACTTCATAATTATGTTCATGGGCAGCCCTGATTTTATCAAAAACCCCTATCTAAGGGCAAAGATGGTTGAAGTCTTGAACTGCTGGATGCCCCGTAGGAGTGGCTCATCAGCTACAGCCACTCTATTTGAAGGGCACCAACTGTCTCTGGAGTATCTTGTTAGAAATCTTCTGAAACTTTATGTTGACATTGAGTTCACTGGCTCTCACACGCAGTTTTATGACAAATTTAACATCCGTCATAATATAGCCGAACTCCTTGAATACCTATGGCAGGTCCCTAGTCATCGTAATGCTTGGAGACAGATTGCTAAGGAAGAGGAAAAGGGTGTCTATCTCAATTTCTTAAACTTTCTGATTAATGATAGTATATATCTTCTCGATGAAAGTCTGAACAAAATTCTTGAGCTAAAAGAATTGGAGGCTGAGATGTCAAATACGGCTGAATGGGAGGGACGACCAGTTCAAGAGAGGCAGGAGAGGACCCGGTTATTCCATTCTCAAGAAAATATTATTCGGATAGATATGAAGCTGGCAAATGAAGATGTGAGTATGCTTGCATTTACTTCAGAGCAAATTACTGCTCCATTCCTACTTCCAGAGATGGTTGAAAGAGTGGCTAGCATGCTCAATTACTTTCTGCTGCAACTGGTGGGTCCCCAAAGAAAATCACTTAGTCTGAAAGATCCAGAGAAATATGAATTTCGACCAAAGGATTTACTGAAACAGATTGTGCACATATATGTTCATCTGGCTAGAGGTGATAGGAATTCCATCTTCCCAGCTGCCATCTCCAAGGATGGTCGATCATACAATGATCAGTTGTTTGGTGCTGCAGCAGATGTCCTTCACAGAATAGGTGAGGATGGGAGAATTATACAGGAATTTATTCAACTTGGTGCTAAAGCAAAAGTTGCAGCTTCAGAGGCCATGGATGCTGAAGCTACTCTGGGAGAAATACCAGATGAATTCCTTGATCCAATTCAATACACTTTGATGAAGGATCCGGTTATCTTACCTTCTTCAAGGATAACAGTTGATCGACCTGTCATTCAGAGGCATCTCCTTAGTGATGGTACTGACCCATTCAACCGTTCTCATCTTACTGTGGATATGCTGATTCCTGACAATGAACTAAAAGCAAGAATTGAGGAGTTTGTCAGGGCTCAGGAAATGAAGAAACATAGTGAAGGGCTGAGTTTACAGAGTGCCAAGGCCACGATTCAGACCACAAATGGGGAAATGTTGATTGATTAG 3135 0.451 MAAAKPQRTPQEVEDIIIRKIFLVSITDSEANNADSRIVYLELTAAEILSEGMDLRLSRDTMERILIDRLNGDFSAAAGAGESPFQYLLGCCHRAHEESKKIANMKDKTLKSEMEAVVKQAKKLCVSYCRIHLANPDIFPNRNPSSGSGSASSPLLPLIFAEVGGGIDAFGGSSGGGAKSPPGFLEEFFRDSDFDSLDPILKGLYEELRGSVMKVSALGNFQDSLRALLFLVRFPIGAKSLVNHEWWIPKGVYMNGRAIEMTSILGPFFHVSALPDQTFFRSHPDVGQQCFSDASTRRPSDLLSSFSTIKTVMNNLYDGLYEVLFILLKSKDTREKVLEYLAEVININASRAHIQVDPITCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDSKYVHYSNRLKLSGLTALHASSEEVAEWLNSNKWVKAGENNQSNDDQKRLQQSQEASSSGSTSAGELSNKNSGHGEKTEYHFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDALSTLRSMQERSPTPQAELDISRLEKELESYSQEKLCYEAQILRDNTLIQNALSLYRLMIVRLVGLVGGFKMPLPSTCPMEFATMPEHFVEDAMELLIFASRIPKALDGVVLDEFMNFIIMFMGSPDFIKNPYLRAKMVEVLNCWMPRRSGSSATATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWEGRPVQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKDLLKQIVHIYVHLARGDRNSIFPAAISKDGRSYNDQLFGAAADVLHRIGEDGRIIQEFIQLGAKAKVAASEAMDAEATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDGTDPFNRSHLTVDMLIPDNELKARIEEFVRAQEMKKHSEGLSLQSAKATIQTTNGEMLID* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2436 1044 MobiDBLite consensus disorder prediction 430 467 - -
Dod02g2436 1044 SMART Ubox_2 949 1012 IPR003613 GO:0004842|GO:0016567
Dod02g2436 1044 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 945 1024 IPR013083 -
Dod02g2436 1044 PANTHER - 1 1021 - -
Dod02g2436 1044 ProSiteProfiles U-box domain profile. 945 1019 IPR003613 GO:0004842|GO:0016567
Dod02g2436 1044 PANTHER UBIQUITINATION FACTOR E4 1 1021 IPR045132 GO:0000151|GO:0030433|GO:0034450
Dod02g2436 1044 Coils Coil 524 551 - -
Dod02g2436 1044 MobiDBLite consensus disorder prediction 430 464 - -
Dod02g2436 1044 Pfam Ubiquitin elongating factor core 265 929 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Dod02g2436 1044 SUPERFAMILY RING/U-box 938 1018 - -
Dod02g2436 1044 CDD RING-Ubox_UBE4A 948 1016 - -
Dod02g2436 1044 Pfam U-box domain 946 1016 IPR003613 GO:0004842|GO:0016567
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2436 1 1044 U-box Gene Family AT5G15400 75.095 0.0 1612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2436 K10597 - gmx:100811444 1789.24