Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2422 ATGTCAACCGCAAAGACAGTCAAAGATGTCTCCCCTCACGAATTCGTCAAGGCTTACGCCTCCCATCTCAAGCGTTCTGGCAAGATGGAGCTGCCTGAGTGGACGGATATTGTGAAGACTGCAAAGTTTAAGGAACTGGCTCCATATGATCCTGACTGGTATTATGTTAGAGCTGCCTCCATGGCGAGAAAGATTTACCTGAGAGGGGGTCTTGGTGTTGGTGCTTTTAAGAGGATCTATGGTGGAAGCAAGAGAAATGGCAGTCGTCCCCCACATTTCTGCAAGAGCAGTGGCAGTATTGCCAGACACATTCTGCAACAGTTGCAGAACATGAGCATTGTTGAGCTTGATACAAAAGGGGGTAGAAGAATCACTTCCAGCGGTAGAAGGGACCTTGATCAAGTTGCTGGGCGCATTGTGGTTGCTCCTTGA 432 0.4861 MSTAKTVKDVSPHEFVKAYASHLKRSGKMELPEWTDIVKTAKFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCKSSGSIARHILQQLQNMSIVELDTKGGRRITSSGRRDLDQVAGRIVVAP* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2422 143 Pfam Ribosomal protein S19e 6 140 IPR001266 GO:0003735|GO:0005840|GO:0006412
Dod02g2422 143 SUPERFAMILY "Winged helix" DNA-binding domain 6 141 IPR036390 -
Dod02g2422 143 ProSitePatterns Ribosomal protein S19e signature. 90 109 IPR018277 GO:0003735|GO:0005840|GO:0006412
Dod02g2422 143 PANTHER 40S RIBOSOMAL PROTEIN S19-3 3 142 - -
Dod02g2422 143 Gene3D - 1 142 IPR036388 -
Dod02g2422 143 PANTHER 40S RIBOSOMAL PROTEIN S19 3 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
Dod02g2422 143 SMART Ribosomal_S19e_2 6 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2422 Dod-Chr2 53451494 53453634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2422 1 143 Cytoplasmic Ribosomal Protein Gene Family AT3G02080 88.112 2.27e-95 270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2422 02 53451494 53453634 Dod02g2422 02 53451494 53453634 ECH