Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2407 ATGTTTTCTTCTTTTTCTTCTTCTTTTCATTCCAGTTCAGTAATCAAATGGAGTCCCTTCACTTCCCAATTCCACTTCCTCTTCCTCTTCTTTCTCCTCCTCTTCTACTTGCCCCGAAACGACGCCGTTTCGCTGAGTCCCGACAAACCCGTGCTCCTTAAACTCAAGAACTCCCTCTCCGACCCTACCGGAATGCTCTCCACGTGGACCTCCACCGCCGCCGGCGACTCCGACCACTGCTCCTGGCACGGCGTTCTTTGCGACTCGAATTCGCGCGTCGTCGCCGTCAACCTGACCGGAAACGGAAGAAGCAACCGGAATCATCCTTGCTCCGATTTCGCCCAATTTCCATTCTACGGTTTCGGAATCAGGAGGAGCTGCAACGAGAGCAACGGTTCCCTGTTCGGAAAGATTTCTCCGGTGATCGCGGAGCTCGCCGAGCTCAGGGTCCTCTCTCTCCCGTTCAACGGGTTTGGCGGTGAGATTCCAAGTGAAATTTGGAGCATGGAGAACTTGGAGGTGCTCGATCTCGAAGGGAACTTGATTGGTGGTCACCTTCCTCTTCGTGTCAGTGGTTTGAGGAACTTGAGGGTTCTGAATTTGGGGTTCAATAGGTTTGTTGGTGAGATACCAACCTCAATTGCTTCACTTGAGAGCTTGGAGGTTTTGAATTTGGCTGCTAATGAGTTGAACGGTTCAGTTCCTGCCTCTTTGGGCAGGCTTAGAGGGGCATATCTGTCGTTTAACGAGCTTTTGGGTGTTGTTCCCAAGGAGATTGGTGAGAATTGCGGTAACCTTGAACATCTGGATTTGTCAGGGAATCTCCTGGTCGGGGGCATTCCCGGAAATTTAGGGAATTGCGGGCGTTTGAGAACGCTTTTGCTGTATTCGAATCTGTTGGACGGGGCTATTCCTCGTGAGCTTGGCAGCCTCAGGAGCCTGGAAGTGTTGGATGTTTCCAGGAACACTCTCAGCGGTCCGGTGCCCCAGGAGCTTGGGAATTGCTCGGAGCTGTCCGTCCTTGTGCTGTCGAACCTTTTCAATCCGACCGGAGTTGTTGTGGGCGATTCTCCGGTGGGGCGATCGATTACTGTGAATGATGAATTGAATTACTTTGCAGGCGCATTGCCTGCGGAGGTTGCGTTGCTGCCGAAGCTGAGAGTGCTGTGGGCTCCGATGGTGAATCTGGAAGGCAGTTTTCCGGGCAGTTGGGGTGGATGTGACAGCCTGGAGGTGGTTAATTTGGCTCAGAATTATTTCACTGGGGAGTTTCCTAACCAGCTTAGTTCCTGCAAGAAGCTGCATTTTCTTGATTTGAGTTCAAACAACTTCACTGGTGAGCTTTCTGCTGAACTTGGTGTCCCTTGCATGACTCTGTTTGATGTAAGTGGGAACATATTGTCTGGTTCAATTCCTGAATTTGCCAGCGACCTTTGTCCCCCAGTTCCTTCCTGGAATGGAAATCTGTTTGAATCTGATAACATGTCCCCTCCATATGCATCATTTTTTACATCAAAGGCTCGTGATAGAGCCACCCTTTTGCCGTTACTAGGAGGGGTTGGTCTTTCAGTTTTCCACAACTTTGGGCGAAACAACTTCACTGGGATTCACTCTTTACCAATAGGACTTGATAGGCTGGGGAAAGAAACTGCTTACACGTTTCTTGTTGGAGAAAACAAGCTTACAGGACCCTCTCCAACATCTTTATTTGAGAAATGTGATGGATTAGATGCATTGCTTTTGAATGTCAGTTATAATAGGTTGTCTGGTCAGATTCCTTCCCACTTTGGTGGAACATGCAGATCATTGAAGTTTTTGGATGCATCTGGAAATCAGATTGCAGGACCAATTCCTGCTGCTTTAGGGGACTTGGTCTCTCTTGTTGCTCTGAACCTCAGTTGGAATCAACTGCAAGGGCAGATTCCCACCAGCCTTGGCCAGTTGAAGGATCTAAAGCTTCTCTCTTTGGCATGTAATCACTTAAGTGGCTCTATCCCTACCAGCCTGGGGCAGTTGCACTCTTTAGAAGTCTTGGACCTTTCTTCAAACTCTCTTACTGGTGAGATTCCAGAGGCTATTGAGAACATGAGAAATCTGACTGATGTGTTGCTCAATAACAACAAGCTTTCTGGACACATACCTGCTGGTTTCGCAAGTTTCACTACGCTCTCTGCTTTTAATGTGTCTTTCAATAACTTATCTGGATCCTTGCCATCACATAGCAACTTGATTAAATGCAGTAGTGCTGTTGGGAATCCATTAATCCAATCTTGTCGCGGGTTTTCTCTAACCGTGCCATCGACGGATCAACAAGGGCAGGTTGCTGATTCTTATAGTGCTGCACCAGCACAAGCTTCTGGCAACAAGAGTGGGTTCAATTCTATTGAGATAGCATCCATAACTTCTGCTTCAGCCATTGTTTCTGTTCTCATAGCACTGATTATTCTGTTCATTTACACGCGGAAGTGGAAACCAAAGTCCAGGGTTGCTGGGACTGCAAGAAAAGAAGTTACTGTGTTCACTGATATTGGGGTTCCATTGACATTTGAAAATGTTGTCCTTGCCACGGGGAATTTCAACGCAAGCAACTGTATTGGGAATGGAGGATTTGGGGCAACCTATAAGGCAGAGATATCGCCGGGAAACTTGGTGGCTGTCAAGCGCCTCGCAGTTGGACGTTTCCAAGGTGTTCAACAATTCCATGCAGAGATCAAGACCCTTGGAAGGCTTCATCATCCAAATCTTGTCACCCTGATTGGTTATCATGCATGTGAGACAGAGATGTTCCTCATATACAACTATTTGCCAGGTGGTAATCTGGAAAAGTTTATCCAGGAGAGGTCCACGAGAGCTGTGGATTGGAGAATTCTTCACAAGATTGCATTAGACATAGCGCGTGCACTCGCCTACCTGCATGATCAGTGTGTCCCTCGCGTCCTTCACCGCGACGTCAAGCCCAGCAACATCTTGTTGGATGAAGATTTCAATGCTTATCTATCTGACTTTGGATTGGCCAGACTCCTGGGCACCTCAGAGACCCATGCTACCACTGGCGTAGCAGGAACATTTGGTTATGTTGCTCCTGAATATGCCATGACATGCCGGGTCTCTGATAAGGCTGATGTGTATAGCTACGGTGTGGTGCTCCTGGAGCTGCTCTCGGACAAGAAGGCATTGGATCCTTCATTCTCTTCTTATGGCAATGGTTTCAACATAGTAGCATGGGCATGTATGCTACTGAAGCAAGGTAGGGCTAAGGAGTTCTTCACTGCTGGGTTATGGGATGCAGGACCCGGAGATGATTTGGTAGAGGTCCTACACTTAGCAGTTGTGTGTACGGTTGACTCTCTCTCTACCAGACCTACAATGAAACAGGTTGTAAGGCGGCTTAAGCAACTTCAACCCCCACCATGCTAG 3417 0.4811 MFSSFSSSFHSSSVIKWSPFTSQFHFLFLFFLLLFYLPRNDAVSLSPDKPVLLKLKNSLSDPTGMLSTWTSTAAGDSDHCSWHGVLCDSNSRVVAVNLTGNGRSNRNHPCSDFAQFPFYGFGIRRSCNESNGSLFGKISPVIAELAELRVLSLPFNGFGGEIPSEIWSMENLEVLDLEGNLIGGHLPLRVSGLRNLRVLNLGFNRFVGEIPTSIASLESLEVLNLAANELNGSVPASLGRLRGAYLSFNELLGVVPKEIGENCGNLEHLDLSGNLLVGGIPGNLGNCGRLRTLLLYSNLLDGAIPRELGSLRSLEVLDVSRNTLSGPVPQELGNCSELSVLVLSNLFNPTGVVVGDSPVGRSITVNDELNYFAGALPAEVALLPKLRVLWAPMVNLEGSFPGSWGGCDSLEVVNLAQNYFTGEFPNQLSSCKKLHFLDLSSNNFTGELSAELGVPCMTLFDVSGNILSGSIPEFASDLCPPVPSWNGNLFESDNMSPPYASFFTSKARDRATLLPLLGGVGLSVFHNFGRNNFTGIHSLPIGLDRLGKETAYTFLVGENKLTGPSPTSLFEKCDGLDALLLNVSYNRLSGQIPSHFGGTCRSLKFLDASGNQIAGPIPAALGDLVSLVALNLSWNQLQGQIPTSLGQLKDLKLLSLACNHLSGSIPTSLGQLHSLEVLDLSSNSLTGEIPEAIENMRNLTDVLLNNNKLSGHIPAGFASFTTLSAFNVSFNNLSGSLPSHSNLIKCSSAVGNPLIQSCRGFSLTVPSTDQQGQVADSYSAAPAQASGNKSGFNSIEIASITSASAIVSVLIALIILFIYTRKWKPKSRVAGTARKEVTVFTDIGVPLTFENVVLATGNFNASNCIGNGGFGATYKAEISPGNLVAVKRLAVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHACETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDEDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACMLLKQGRAKEFFTAGLWDAGPGDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPPPC* 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2407 1138 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 23 1136 - -
Dod02g2407 1138 SMART LRR_typ_2 169 192 IPR003591 -
Dod02g2407 1138 SMART LRR_typ_2 217 241 IPR003591 -
Dod02g2407 1138 SMART LRR_typ_2 193 216 IPR003591 -
Dod02g2407 1138 SMART LRR_typ_2 696 719 IPR003591 -
Dod02g2407 1138 SMART LRR_typ_2 263 287 IPR003591 -
Dod02g2407 1138 SMART LRR_typ_2 672 695 IPR003591 -
Dod02g2407 1138 SMART LRR_typ_2 311 335 IPR003591 -
Dod02g2407 1138 SMART LRR_typ_2 624 648 IPR003591 -
Dod02g2407 1138 Pfam Leucine rich repeat N-terminal domain 47 88 IPR013210 -
Dod02g2407 1138 SUPERFAMILY L domain-like 76 280 - -
Dod02g2407 1138 Pfam Leucine Rich Repeat 265 287 IPR001611 GO:0005515
Dod02g2407 1138 Pfam Leucine Rich Repeat 674 696 IPR001611 GO:0005515
Dod02g2407 1138 Gene3D Ribonuclease Inhibitor 46 238 IPR032675 -
Dod02g2407 1138 SMART serkin_6 859 1133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2407 1138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 979 991 IPR008271 GO:0004672|GO:0006468
Dod02g2407 1138 CDD STKc_IRAK 865 1133 - -
Dod02g2407 1138 ProSitePatterns Protein kinases ATP-binding region signature. 865 887 IPR017441 GO:0005524
Dod02g2407 1138 ProSiteProfiles Protein kinase domain profile. 859 1133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2407 1138 Gene3D Phosphorylase Kinase; domain 1 821 934 - -
Dod02g2407 1138 Gene3D Ribonuclease Inhibitor 240 349 IPR032675 -
Dod02g2407 1138 Gene3D Ribonuclease Inhibitor 364 499 IPR032675 -
Dod02g2407 1138 Gene3D Ribonuclease Inhibitor 514 769 IPR032675 -
Dod02g2407 1138 Gene3D Transferase(Phosphotransferase) domain 1 935 1134 - -
Dod02g2407 1138 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 23 1136 - -
Dod02g2407 1138 SUPERFAMILY Protein kinase-like (PK-like) 841 1131 IPR011009 -
Dod02g2407 1138 Pfam Protein kinase domain 862 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2407 1138 SUPERFAMILY L domain-like 239 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2407 Dod-Chr2 52982659 52986075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2407 48 1138 Receptor kinase-like Gene Family AT3G02130 65.471 0.0 1363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Dod02g2407 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2407 - - gmx:100819882 1700.26