Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2401 ATGATTAACAGCCCAAAAGAAACGGATTTTCCACTGAAACAAGAAGGTCTGTCAAGTGATCATGACAAAGCAAAGGCTCCATCAAGCTCATCATCATCGCATTGGCTAAGGTTGAAGGATCCAAGGATTGTGAGGGTATCTCGAGCCTTTGGAGGGAAAGACAGGCATAGCAAGGTGTGCACAATAAGAGGACTAAGAGACAGGAGGGTGAGGCTTTCAGTCCCCACAGCTATTCACCTGTATGATCTCCAAGACAGGCTAGGGCTCAGTCAACCTAGCAAGGTTGTTGATTGGTTGCTTAATGCAGCTAAGCATGAAATTGATGAACTCCCTCCACTGCCATTTCCTCCAAGGAACTTCACCCTTGGTTATCCATCTCTTGGTACTTCTAATAATGATGTTAGCACCTCTAGTCCATGCCAAAATGCTATTTGGAAACCAAAGTCTAAAGAAGTTCCAGGAGAAATGGTCACTGGTGACAAAGAAAATTGGATGAATAGAAGTGAAGAAGATGATAAACAAGGAAGCATTAATGACTGTCCTACTAGTGCACATGTTTTGCCTAACAATAATCTCTTACCAAGACCAAATCTTCCTTCCTTCCTTGGCTTGTTGAACACTGTGCCATTTGGTTACCAATGGGAGAATTCATCAGCTGATGTAGCTCAAATGGGAAACCAGGGATTTGTGAACCAAGCAGATGTACACAGCATTAATGTTGTACCTTTCCCATCAACTCTTGGTGCTTCTCAAATATTGTTGTATCCTCCAGGGGCAGCACAGTCATATTTCCCTTCACATGTTGCAGCAATGGAAATGGATCCAAGACAAATCAGCCACTATCAACAGGTACTGGGTTCAAGCTCTCATCATCAAAATCTTCCAACCAATTCTGTTAACCTCTCTCATCAACACCACCTCATGAATCAACTGGGTAAACCCTTCAGCTTGGCCATGATGACTCCCAAACTTTTCCATTCACCTAACAGTAGTGAAAGCCAATCACATAAAGACCAGGATTTTCCTTCCAAGTGA 1035 0.43 MINSPKETDFPLKQEGLSSDHDKAKAPSSSSSSHWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLSQPSKVVDWLLNAAKHEIDELPPLPFPPRNFTLGYPSLGTSNNDVSTSSPCQNAIWKPKSKEVPGEMVTGDKENWMNRSEEDDKQGSINDCPTSAHVLPNNNLLPRPNLPSFLGLLNTVPFGYQWENSSADVAQMGNQGFVNQADVHSINVVPFPSTLGASQILLYPPGAAQSYFPSHVAAMEMDPRQISHYQQVLGSSSHHQNLPTNSVNLSHQHHLMNQLGKPFSLAMMTPKLFHSPNSSESQSHKDQDFPSK* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2401 344 Pfam TCP family transcription factor 52 150 IPR017887 -
Dod02g2401 344 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 340 IPR005333 GO:0003700
Dod02g2401 344 MobiDBLite consensus disorder prediction 323 344 - -
Dod02g2401 344 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Dod02g2401 344 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 340 - -
Dod02g2401 344 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2401 Dod-Chr2 52844697 52847783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2401 35 282 TCP Transcription Factor Family AT3G02150 43.985 2.87e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod02g2401 TCP 1.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2401 - - aprc:113867214 453.366