LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod02g2399	ATGTCATCCCTTGAGTTTAACAGAACAATTCAAGTAGAAGCTCCATCAGCCAGTCAAATCAAAAACCCAGAAAACCCCAATTCAGGAGCAGCAGTGAAGCAACTTGACAACCCAGGCCATCAATCCCCGGATTTCTATGATATTGTCATAGACTCAATGCAAAGAGAAGCACCAGGATTGTCGGTGAAAACTGCGACTAGAGAGGAAAAGAAGGGTCGTATCTTGAAATACATAGACTCTCCCCGGCCTTTGCAGGCTACCGAATCTGGCAATGCGGCAGTTATGGTCGCCAATGAGCCCTTCTATGTCCTGGCGAAGTCTCGGAAAACACCATTGGATTCGCCTAGGCACTCTTACGATGGGAGGGACCTGCAAAATATACTCAAAGGCGCTACAAAGCACAAGGAAATCGCAAGGCTTTCCTTGGACGGCAGAGAAGGATCCATTATGGGTTTCAATGAATCAGCAAAATCTCAAAACCTTTTGAAGGCAGCACAGAAAGGGTATGGGAGTTCCAGCACAATGCTCAGGCAGCAGGAGGAGCCAGAAACTACTAAAAGACCATCGAGTGTTGTAGCAAAGTTAATGGGACTGGATGCCTTCCCAGACTGGACACAAACTTGTGACACTTCACCACGGATGTCTAGCTGCAGCACCAAAAGAAACAAGACCTCTGCAAAATCTAGCATGGCTGATGGATACAACCAACACCAAAGTCCAGTATCCCCAGTAACAAGCAAGGGATCTACCTTGGTTATGTCTAGGAGGGATGATGCCTCATTCACAGATGTGACACCATATTCACGTTTTTCACTAGAACCAATCCCATGGAGGCATCCTGATGCAAGCCAGGATTCTCAATTACGAGTTTCCAAGGGAAGTGAATCTTCAACAAAATCCTCAAATTCTACTCTCTCTGTATATGGGCAAATTGAGAGAAGGGTGGCTGATCTTCAGTTCAAAAATTCTGGAAAGGATCTCAGAGTCCTTAAACAGATTCTCGAAGCAATGCAGAGATATAAAGATTCATTGGATAGTACAAGAGAACAGGCTTCAAATTATCCATCTGACAGAAGTCTCAGTGAAAGCTCAAAATCACAAAGCCCAAGAATACAACAGAAGGAGGCAACATCATTCACTGGCAAGATGCCAAATTCAACCCAGGGTAGCAAATTGCCGATTGTCATCATGAAACCAGCACAAGTCACAATAAAAAACAATAGCCCTGGTTCCACAGAAATGTCGATTCATGATAAATCAGGCCATAGCAAGTTTTGCCCTGGTAATCCCATAAATGGAAGATTGGTTGACAAGCTCAACAGGCAAACAGAAAAAGGTATGAGTCCAACAATCAGACAACTCAAGGATCCTTTCAATCAACCCTTCCATTCAGCAGGTAAGAGTAATGAGATGAGAACTTCAAAATTGATGCAATCCTCAAAAGTTCTTCAGGACGTCAAGGGAGAAAATACCACTAACTCCAGCCAGACAGCAGAGACCAGAAGCCCAAGAGTACAAAAGAAGATCAGTTTGGAGAGGCGTTCACCGACCAGCCAAACATCAGATTCCAATAGTAACAGAAGGCAAGACAAGCAATTATTGGAATCGTCCTCCTCATGTACAAAACTAAGAAGAAAAATATCTGCATTGCAGCAACAAAATGAATGTTTCAGCAAGATCATGCGTCAAAGGAGGGATTTTAAGCATGAAGTTGATGTCATTTGCTCAGATTTCAACAGCAACAGAAGCATGGATTCTCACAGTGACACAGAAACCATTCAAATTGATCAATCCGAAAAGAACAATAGCATCTCCAGCCAGCTGCATGGCCTGAACCGAAATAATGCAACGAAAGAGCCAAGCAAGGAAAGCAACACGGCTGAGACGACAATTACAGCAGAACAACCAAGTCCTGTGTCTGTTCTTGATGCAGAATTCTATATTGAAGACCCACCTTCTCCCATTAAAAAGAAGTTAGAAATCTCAAAAGATTTAGATGAAGTTCTCACCTCTTATGATAGCAGAGAGGAAATATGGGAGTATCCTCTTTCAACTAATACGACAAAGGCCAACTTCAGCAATGGAATCAATGATAATGACTTTCAAGCCCAGAATTTTGTTCAAATTCTTCAACAAATTGACTACAATAACCAGAAATTCACCAATTCCAGAGAATGTAAAGACCCTGACCATAAATACATATCAGAAATACTGGTAGCATCAGGGCTGCTCAGTAGTCCCAGCTCAAGCCAGGCAGTTCATTCATCAGGTCACCCAATTAACCCAAAGTTGTTCCATGCACTTGAACAAATCAAGACAAACAAGATGCGTTTCAATGTTGAACAGAATGCTAACAAGATCGTCAGGATGAATAATCCTGAGAAAATGCAAAGAAAACTCATATTCGATGTCATTAATGACATGCTACTTCAAAAACTAATATTGGAGAGTTCTTCCACTCTGCGGTGCCTGCCAAATCAGCCAGCAGTTCACAAACCAAATGGACAGCAAGTTTTGGATGAGCTTTGCAGAAAGATTGATGAGTTGCAACATAAAAATAGGAATGTCTGCCAAGCTAATGAGGACGAGAATTTGACAAGTCACTTGTGGGGAGATTTGATGCATCACCCCACAATTTGGACAGAGTGCAATGGTGAGATCCCATATATTGTGTTGGATATTGAACGGTTGATCTTTAAAGATTTGATAGCAGAAGTTGCGAGAGGTGAAGTAGCTAACCATCCTGGTAAGCATTGCAGGCAACTGCAGTTTGCCAAGTAG	2781	0.4243	MSSLEFNRTIQVEAPSASQIKNPENPNSGAAVKQLDNPGHQSPDFYDIVIDSMQREAPGLSVKTATREEKKGRILKYIDSPRPLQATESGNAAVMVANEPFYVLAKSRKTPLDSPRHSYDGRDLQNILKGATKHKEIARLSLDGREGSIMGFNESAKSQNLLKAAQKGYGSSSTMLRQQEEPETTKRPSSVVAKLMGLDAFPDWTQTCDTSPRMSSCSTKRNKTSAKSSMADGYNQHQSPVSPVTSKGSTLVMSRRDDASFTDVTPYSRFSLEPIPWRHPDASQDSQLRVSKGSESSTKSSNSTLSVYGQIERRVADLQFKNSGKDLRVLKQILEAMQRYKDSLDSTREQASNYPSDRSLSESSKSQSPRIQQKEATSFTGKMPNSTQGSKLPIVIMKPAQVTIKNNSPGSTEMSIHDKSGHSKFCPGNPINGRLVDKLNRQTEKGMSPTIRQLKDPFNQPFHSAGKSNEMRTSKLMQSSKVLQDVKGENTTNSSQTAETRSPRVQKKISLERRSPTSQTSDSNSNRRQDKQLLESSSSCTKLRRKISALQQQNECFSKIMRQRRDFKHEVDVICSDFNSNRSMDSHSDTETIQIDQSEKNNSISSQLHGLNRNNATKEPSKESNTAETTITAEQPSPVSVLDAEFYIEDPPSPIKKKLEISKDLDEVLTSYDSREEIWEYPLSTNTTKANFSNGINDNDFQAQNFVQILQQIDYNNQKFTNSRECKDPDHKYISEILVASGLLSSPSSSQAVHSSGHPINPKLFHALEQIKTNKMRFNVEQNANKIVRMNNPEKMQRKLIFDVINDMLLQKLILESSSTLRCLPNQPAVHKPNGQQVLDELCRKIDELQHKNRNVCQANEDENLTSHLWGDLMHHPTIWTECNGEIPYIVLDIERLIFKDLIAEVARGEVANHPGKHCRQLQFAK*	927

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	347	391	-	-
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	1	35	-	-
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	165	179	-	-
	Dod02g2399	926	PANTHER	LONGIFOLIA PROTEIN	1	925	-	-
	Dod02g2399	926	PANTHER	LONGIFOLIA PROTEIN	1	925	IPR033334	GO:0051513
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	284	306	-	-
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	512	542	-	-
	Dod02g2399	926	Coils	Coil	330	350	-	-
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	445	542	-	-
	Dod02g2399	926	Coils	Coil	839	859	-	-
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	1	45	-	-
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	209	251	-	-
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	165	190	-	-
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	272	306	-	-
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	343	391	-	-
	Dod02g2399	926	Pfam	Domain of unknown function (DUF4378)	730	905	IPR025486	-
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	579	635	-	-
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	445	504	-	-
	Dod02g2399	926	MobiDBLite	consensus disorder prediction	406	431	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod02g2399	Dod-Chr2	52819485	52822518	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod02g2399	40	921	TRM (TON1 Recruiting Motif) Superfamily	AT1G74160	32.328	3.52e-84	288

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod02g2399	-		-	aprc:113867263	1050.04