Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2386 ATGATGCGGCGGCGGCGGAGGTGCTGTCCAGATCTGGATTCAAAACCACAAACCGAAAGAAAGAAAAATGAAGAAGCAGAGCACAAGAAGGAGTGGAAACTATATACATATATATATATATATATATATATATATATATATATATATAAAGAGAGAGATTTCAAGAGGAAGAGCTCACCGAACGGCGGCGGCGGCGGCAACGGATGGCGGCGGTGGCGAAGACGGGGACGGATCCTCTCTGGTGCAGGTTCGACTCCTCACTGGTTTCCTTCGGCCTCGGCTCAGGGTCTTTCACTCTTTCTTCTTCTTCTTCTTCTTTGGCTTCTTTCGGATATTCGAAATCAGCAGCAGCAAGCGATCGATGAACTCTTGCTTGCTTCGCTGCTGAATCTTCATTTCCATCACTCTCCAATGGCCGCACCCGGTGCTCGTACTAACTCCTTCGGTCAGACCGAGATTAACTGGGACAAGCTAGATAAAACGAAGTTCTATGTCGTAGGAGCTGGGCTCTTTACAGGTGTTACGGTGGCGCTCTACCCGGTTTCTGTTGTGAAAACTAGGCTGCAGGTGGCTTCAAAGGATACCGTGGAGAGGAGTGCATTTTCTGTTGTGAAAGGATTACTGAAAACGGATGGCATCCCTGGTTTGTATAAAGGGTTTGGCACAGTTATCACTGGTGCAATTCCTGCCAGAATCATATTCCTCACTGCCTTAGAGACCACTAAGGTGGCTGCCTTTAGGATGCTTGAGCCATTTAGGCTTTCTGAAACTACCCAGGCTGCCTTAGCAAATGGAGTTGCAGGCATGGCATCATCACTTTTGTCACAAGCTGTGTTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTACAAGGATACTCGGGGCATGCCCAGTACAGTGGGGGTCTGGATGTTACCCGTAAAGTTTTAAAGTCTGATGGCATCAGGGGATTATATAGAGGGTTTGGTCTATCTGTTATGACTTATTCACCATCTAGTGCTGTATGGTGGGCAAGTTACGGTTCAAGCCAACGCATCATATGGAGAGTCTTGGGGCAAGGTGTGGAATACGAGGAAGGTACTCCTAGTCTGTACAAGATTGTATTTGTTCAGGCTACTGGAGGGATTATTGCTGGTGCAACTGCATCCTGCATTACAACCCCGTTGGATACTATCAAAACACGGTTACAGGTGATGGGACATGAAAAGAGAATCTCTGTAAAACAAGTGGTTAAAGACTTAATCAAAGAGGATGGTTGGAAAGGTTTATATAGAGGGTTGGGCCCAAGATTTTTCAGCATGTCAGCATGGGGTACTTCAATGATATTAGCTTATGAATATCTGACATCATCCGTCATCACCATCATATGTCGACAGGGTGAAGTTATTGGTATTAATTACTAG 1407 0.4563 MMRRRRRCCPDLDSKPQTERKKNEEAEHKKEWKLYTYIYIYIYIYIYIYKERDFKRKSSPNGGGGGNGWRRWRRRGRILSGAGSTPHWFPSASAQGLSLFLLLLLLWLLSDIRNQQQQAIDELLLASLLNLHFHHSPMAAPGARTNSFGQTEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVASKDTVERSAFSVVKGLLKTDGIPGLYKGFGTVITGAIPARIIFLTALETTKVAAFRMLEPFRLSETTQAALANGVAGMASSLLSQAVFVPIDVVSQKLMVQGYSGHAQYSGGLDVTRKVLKSDGIRGLYRGFGLSVMTYSPSSAVWWASYGSSQRIIWRVLGQGVEYEEGTPSLYKIVFVQATGGIIAGATASCITTPLDTIKTRLQVMGHEKRISVKQVVKDLIKEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLTSSVITIICRQGEVIGINY* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2386 468 Pfam Mitochondrial carrier protein 168 243 IPR018108 -
Dod02g2386 468 Pfam Mitochondrial carrier protein 370 450 IPR018108 -
Dod02g2386 468 Pfam Mitochondrial carrier protein 261 348 IPR018108 -
Dod02g2386 468 Gene3D Mitochondrial carrier domain 163 455 IPR023395 -
Dod02g2386 468 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 151 450 - -
Dod02g2386 468 SUPERFAMILY Mitochondrial carrier 156 449 IPR023395 -
Dod02g2386 468 MobiDBLite consensus disorder prediction 1 25 - -
Dod02g2386 468 ProSiteProfiles Solute carrier (Solcar) repeat profile. 259 347 IPR018108 -
Dod02g2386 468 ProSiteProfiles Solute carrier (Solcar) repeat profile. 160 244 IPR018108 -
Dod02g2386 468 ProSiteProfiles Solute carrier (Solcar) repeat profile. 367 452 IPR018108 -
Dod02g2386 468 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 151 450 - -
Dod02g2386 468 PRINTS Mitochondrial carrier protein signature 320 338 IPR002067 GO:0055085
Dod02g2386 468 PRINTS Mitochondrial carrier protein signature 376 398 IPR002067 GO:0055085
Dod02g2386 468 PRINTS Mitochondrial carrier protein signature 176 190 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2386 Dod-Chr2 52483479 52494114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2386 153 449 Chloroplast and Mitochondria Gene Families AT5G15640 78.595 5.86e-167 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2386 K15121 - tcc:18601733 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2386 02 52483479 52494114 Dod01g0255 01 4899769 4904762 PCT