Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2384 ATGTTCTCTTGTTTCGTGCCCGTTTTCCGATTCTTCATCAAACCGTTTCCATGCATGTTGCTCCTGTTCCTGCTGTCTTGCACTTGCTTCACTTCAACAGAAGCTTATGATGCACTTGACCCAAATGGAAATATCACAATCAAATGGGATATTATAAGCTGGACACCTGATGGTTATCTTGCTGTTGTTACAATGAACAATTTCCAACAATATCGTCATATCACGGCACCAGGATGGTCACTAGGATGGACATGGGCAAAGAAGGAGGTAATATGGAACATGATAGGAGGGCAGACTACTGAACAAGGGGATTGCTCGAAATATAAGGGTAACACACCGCATTGCTGTAAGAAGGACCCAACAGTTGTAGATTTACTACCTGGAACACCTTACAATCAACAAATCCAAAACTGCTGCAAAGGTGGTGTACTCAGCTCATGGGCGCAAGACCCGACCAATGCGGTCGCAGCATTTCAAATTAGTGTGGGTAGAGCTGGAACCACTAATAGAACGGTCAAAGTGCCGAAAAACTTCACCTTGAAAGCACCAGGACCCGGTTATACTTGTGGGCCAGCAAAAATTGTGAAACCCACCCAGTTCATACAACCAGACCATAGGAGAGTGACGCAAGCACTCATGACATGGAATGTGACATGCACATATTCACAATTTCTGGCTCAGAAAACACCCACTTGTTGTGTCTCCCTCTCATCTTTCTATAATGATACTATTGTGCCCTGCCCGACATGTGCATGTGGCTGCCAGGGCAACTCTTCCCAATCAGGGAACTGTGTAGACCCAGATACACCACATTTGGCATCGGTTGTTGCTAATCCTGCAAAGAATACACCTTTGATTCAATGTACTCGTCATATGTGCCCGATCCGAGTTCACTGGCATGTTAAGGTTAACTACAAGGACTATTGGCGGGTCAAGGTCACTGTCACTAATTTCAACTACAGGATGAATTATTCTGAATGGAACTTGGTTGTTCAACACCCAAACTTTGACAATCTGACTCAGCTTTTCAGTTTCAACTACAAGTCATTAACACCCTATGGGTCAATAAATGATACGGGAATGCTATGGGGAATTAAGTTCTACAATGATTTGCTCATGCAAGCTGGTCGTCTTGGTAATGTACAGTCAGAGCTACTTTTCCGAAAGGATAAATCTACTTTCACTTTTGACAAGGGTTGGGCTTTTCCTCGGAGGATCTATTTCAATGGTGACAACTGCGTGATGCCGCCACCTGATGCTTATCCGTGGTTACCGAACGCTGGTTCCCGGCAAGAGGTTTCCCTGCTTGCTTTGATGATGACTTCCTTGGTAGCCTGGGTATTCTATGCATATGCTTAA 1359 0.4452 MFSCFVPVFRFFIKPFPCMLLLFLLSCTCFTSTEAYDALDPNGNITIKWDIISWTPDGYLAVVTMNNFQQYRHITAPGWSLGWTWAKKEVIWNMIGGQTTEQGDCSKYKGNTPHCCKKDPTVVDLLPGTPYNQQIQNCCKGGVLSSWAQDPTNAVAAFQISVGRAGTTNRTVKVPKNFTLKAPGPGYTCGPAKIVKPTQFIQPDHRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCACGCQGNSSQSGNCVDPDTPHLASVVANPAKNTPLIQCTRHMCPIRVHWHVKVNYKDYWRVKVTVTNFNYRMNYSEWNLVVQHPNFDNLTQLFSFNYKSLTPYGSINDTGMLWGIKFYNDLLMQAGRLGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSRQEVSLLALMMTSLVAWVFYAYA* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2384 452 PIRSF COBRA 9 452 IPR006918 GO:0010215|GO:0031225
Dod02g2384 452 PANTHER COBRA-LIKE PROTEIN 11 451 - -
Dod02g2384 452 PANTHER PROTEIN COBRA 11 451 IPR006918 GO:0010215|GO:0031225
Dod02g2384 452 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2384 Dod-Chr2 52348868 52352465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2384 21 447 COBRA Gene Family AT3G02210 77.262 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2384 - - gmx:100783820 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2384 02 52348868 52352465 Dod01g0256 01 4911418 4914756 PCT
Dod01g0257 01 4915575 4916637 Dod02g2384 02 52348868 52352465 PCT