Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2383 ATGAGGCTTGTCATCTCAGCTCTTTGTGTTCTTGTGCTTTTCTCTAATGCAGTTGCTTATGATCCTTTGGATCCAAATGGAAACGTAACGATCAAATGGGATGTCGTGTCTTGGACACCGGACGGCTATGTGGCAGTGGTAACACTCCACAATTTCCAAATGTTTCGGCACATCATGAATCCGGGGTGGACCTTGGGATGGACATGGGCTAAGAAAGAAGTTATATGGACCATGGTAGGAGCTCAAACCACAGAGCAAGGAGACTGCTCAAAGTTCAAAGGGAATATACCTCACTGCTGCAAGAAAACTCCCACAGTTGTGGACTTGCTCCCTGGTGTACCTTACAATCAGCAATTCTCAAACTGCTGTAAGGGTGGGGTGGTGGCAGCATGGGGCCAAGATCCTTCACAAGCCATCTCATCCTTCCAAGTGAGTGTTGGGCAAGCTGGTACCTCAAATAAGACAGTTAAACTCCCCAAGAATTTCACTCTCTTGGCTCCAGGACCAGGCTATACTTGTGGCCCCGCCAAGGTTGTTCCTTCCACCACTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTGATGACATGGAATGTTACCTGCACATACTCGCAATTTCTAGCAAGAAAGAACCCAAGTTGTTGTGTATCTTTGTCATCCTTCTATAATGAAACCATTACCCCTTGTCCGTCCTGTGCCTGTGGCTGCCATAACAAAAAGAACTGTGTGAAGAGTGACTCTAAACTTCTCAGCATGGTGGGGGTTCACACTCCAAAGAAAGACAATGAACCATTGCTGCAATGCACTCATCATATGTGTCCAATCAGGGTACACTGGCATGTAAAGCTCAACTACAAGGACTATTGGCGAGTCAAGATCGCCATAACAAATTTCAATTACAAGATGAATTACTCCCTCTGGACTCTTGCTGTTCAGCATCCAAATTTCAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCACTACTTCCCTATGAGTCCATAAATGACACTGGCATGTTCTATGGAATGAAATACTATAATGATCTATTAATGGAAGCTGGACCAACTGGGAATGTTCAGTCAGAAGTGCTTTTTCAGAAGGACAAGGATACATTCACATTCAAGCAGGGGTGGGCATTTCCAAGGAAGGTTTACTTTAATGGTGATGAATGCATGCTGCCCCCTCCTGATACCTACCCATTTCTCCCCAATTCTGCCCCTGCAAATCAACTAACATTCCCAGCATTCATTTTCTCATTGCTTTTTTTGCTAGCTTTTTGGTAA 1296 0.4483 MRLVISALCVLVLFSNAVAYDPLDPNGNVTIKWDVVSWTPDGYVAVVTLHNFQMFRHIMNPGWTLGWTWAKKEVIWTMVGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSQAISSFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTTFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPSCACGCHNKKNCVKSDSKLLSMVGVHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYKMNYSLWTLAVQHPNFNNVTQVFSFDYKPLLPYESINDTGMFYGMKYYNDLLMEAGPTGNVQSEVLFQKDKDTFTFKQGWAFPRKVYFNGDECMLPPPDTYPFLPNSAPANQLTFPAFIFSLLFLLAFW* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2383 431 PANTHER COBRA-LIKE PROTEIN 4 429 - -
Dod02g2383 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Dod02g2383 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Dod02g2383 431 PANTHER PROTEIN COBRA 4 429 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2383 Dod-Chr2 52346510 52348858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2383 1 427 COBRA Gene Family AT3G29810 66.059 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2383 - - gmx:100798678 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2383 02 52346510 52348858 Dod01g0257 01 4915575 4916637 PCT
Dod01g0258 01 4916765 4917363 Dod02g2383 02 52346510 52348858 PCT