Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2352 ATGGATCCACACGATGAGCAACACTCCAATCCCTTCGCAACAACACATTCCGATTCCGACTCCGATTCCGACTCAGTGAGTTGCTTCGTCACCGATCTCTTCGAGACTCGCTCCGAGCGATCTCGCTATTGTTCCTGCGGCGACGTCGACATAAACCCCTTCTCCGGCGTCGTTTGCGACCTTCACGGGGAAGGGGCGTTAGGGTTAGGGTTCGGAGCTGAAATCGGGACCCAAAACCACCATCATGATGGGGTTTTCGATTTTTCCGTGGGTGGTGATGGTTCGGGTGGGCTTAGGGTTGTTGGGTTCGGGTCCGATTCTGATTCGGGTGGCGAGGATGGTGAGCATGGTGATGGTGATCATAATAGGGTTGATGGTGGATTTGATGATTTTAATGATAGGTTGTGTTGGGATAGCCTCCGTTTGGAGGATCAGAGAACAATGAATGAGAGTTTTGAGTGGGAGGAGATAGAGGAGAGGGCGAATGATAGGGAAGATTTGAGCTTGGTGATTGATGAGGTTGAGGTTGATGATCAATCGGTGGCGTCAGGGTTCTCGAACGGCGAGGACTCTGGCGAGGAGGCGCTGAGTTACCTGGAGTGGGAGATTCTATTGGCTGTGAACAATTGGGAGAGGAATTCTATCTTAGAACATGGTGCCAATGTTGATTCGTACTTGGCAGTCGGGGATGGTTATATGTACACAGCTGAATATGATGTTCTCTTTGGGCAGTTTCTGGAGAATGAGAATGCCTTGAAGGGCAGCCCTCCTGCGGCAAAGAGTGTTCTGGAGAATCTTCCTGTGGTGGAGTTGACAAAGGAGGAGTTGCAGGGGAAGAATGTGGCGTGCGCGATTTGTAAAGATGAGATCTTGTTGGAGGAGAAGGTGAGGAGGCTTCCTTGCTCACATTGTTATCATGGAGACTGCATTATGCCCTGGTTGAGTATTCGCAACACCTGCCCTGTTTGTCGGTTTGAGTTGCCAACTGATGATCCTGATTATGAGCAGAGGAAGAGCCAGCGGGCTGCTCATGATCTGTCAGAGTTTGCAACACACATGCAATTTTGA 1068 0.5028 MDPHDEQHSNPFATTHSDSDSDSDSVSCFVTDLFETRSERSRYCSCGDVDINPFSGVVCDLHGEGALGLGFGAEIGTQNHHHDGVFDFSVGGDGSGGLRVVGFGSDSDSGGEDGEHGDGDHNRVDGGFDDFNDRLCWDSLRLEDQRTMNESFEWEEIEERANDREDLSLVIDEVEVDDQSVASGFSNGEDSGEEALSYLEWEILLAVNNWERNSILEHGANVDSYLAVGDGYMYTAEYDVLFGQFLENENALKGSPPAAKSVLENLPVVELTKEELQGKNVACAICKDEILLEEKVRRLPCSHCYHGDCIMPWLSIRNTCPVCRFELPTDDPDYEQRKSQRAAHDLSEFATHMQF* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2352 355 MobiDBLite consensus disorder prediction 1 24 - -
Dod02g2352 355 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 8 355 - -
Dod02g2352 355 Pfam Ring finger domain 283 324 IPR001841 -
Dod02g2352 355 CDD RING-H2_RNF126_like 283 324 - -
Dod02g2352 355 SMART ring_2 283 323 IPR001841 -
Dod02g2352 355 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 8 355 - -
Dod02g2352 355 MobiDBLite consensus disorder prediction 99 125 - -
Dod02g2352 355 ProSiteProfiles Zinc finger RING-type profile. 283 324 IPR001841 -
Dod02g2352 355 SUPERFAMILY RING/U-box 271 331 - -
Dod02g2352 355 MobiDBLite consensus disorder prediction 109 125 - -
Dod02g2352 355 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 244 330 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2352 Dod-Chr2 51733537 51735197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2352 87 339 C3H Transcription Factor Family AT3G02340 40.364 3.80e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2352 - - gmx:100812037 447.203