Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2348 ATGGAGGCGAGGGAGGTGACAGGACTCAACTATTCACTACCTTCAAACCCATCTCCTTACCCAGTTAACCACACTACCATCCAAAACAACATTCCCACATTCCAGTTCCAAAGATTCTCTAACCAATTATATGGTTTCCAGAACCCTCCTCTAGTTCCTGACTTTAGTCCTCAATCCTCATGTATCAGCAGCAACTCCACCTCTGATGAAGCAGATGAGCAACAACTGAGCCTCATCAGCGAGAGGAAGCACAGGAGGATGATATCGAACCGAGAATCGGCGCGCCGATCACGCATGAGGAAGCAGAAGCACCTTGATGAGCTCTGGTCGCAGGTGGTTTGGCTTAGGAATGAGAATCACCAGCTGTTAGACAAGCTGAACCATGTGTCAGAGTGCCATGACCAAGTCCTTCAAGAGAATGCCCAGCTCAAAGAGGAAGCCTCAGAGCTTCGCCAAATGCTGAGTGACATGCAAATTCACAGCCCTTGCCCTTCCCTGAACCCTTTGGAAGATGCCCCTTGCAGCTCAGCTTATCCCACATCTGACAATTCCCAAAACCAATCCGTCTCAAGTTCTATGGACATTCTTGGCTAA 594 0.4882 MEAREVTGLNYSLPSNPSPYPVNHTTIQNNIPTFQFQRFSNQLYGFQNPPLVPDFSPQSSCISSNSTSDEADEQQLSLISERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLLDKLNHVSECHDQVLQENAQLKEEASELRQMLSDMQIHSPCPSLNPLEDAPCSSAYPTSDNSQNQSVSSSMDILG* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2348 197 SUPERFAMILY Leucine zipper domain 82 131 IPR046347 GO:0003700|GO:0006355
Dod02g2348 197 Coils Coil 133 160 - -
Dod02g2348 197 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Dod02g2348 197 PANTHER BZIP TRANSCRIPTION FACTOR 1 189 - -
Dod02g2348 197 CDD bZIP_plant_GBF1 83 134 IPR045314 GO:0003700|GO:0006355
Dod02g2348 197 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Dod02g2348 197 MobiDBLite consensus disorder prediction 159 197 - -
Dod02g2348 197 Gene3D - 80 136 - -
Dod02g2348 197 Pfam bZIP transcription factor 82 140 IPR004827 GO:0003700|GO:0006355
Dod02g2348 197 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Dod02g2348 197 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 189 IPR044521 -
Dod02g2348 197 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2348 Dod-Chr2 51662270 51662932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2348 43 162 bZIP Transcription Factor Family AT3G30530 73.171 3.01e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod02g2348 bZIP_1 2.8e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2348 - - aprc:113863596 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2348 02 51662270 51662932 Dod01g0301 01 5422301 5423315 PCT