Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2334 ATGGAGAAGACAAAATTGTTTCAAGCACCGACAGAACCAGAGGCGCCCCTTGTTTCAAAGAGGGGAGGACGGATATCATCATCTACATCCAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTCGGAAAGGGTGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAACTGCTCAGCAACAGTCGGACAAGTGGGGAATGTTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGATCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAACCCGCAACTCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGA 579 0.4525 MEKTKLFQAPTEPEAPLVSKRGGRISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKNPQLLGVILHLEEEVEKGINIVII* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2334 192 Pfam Ribosomal Proteins L2, C-terminal domain 58 170 IPR022669 GO:0003735|GO:0005840|GO:0006412
Dod02g2334 192 MobiDBLite consensus disorder prediction 1 30 - -
Dod02g2334 192 SUPERFAMILY Translation proteins SH3-like domain 58 177 IPR008991 -
Dod02g2334 192 ProSitePatterns Ribosomal protein L2 signature. 142 153 IPR022671 GO:0003735|GO:0005840|GO:0006412
Dod02g2334 192 Gene3D - 34 120 IPR014722 -
Dod02g2334 192 PANTHER - 47 180 - -
Dod02g2334 192 SMART Ribosomal_L2_C_2 58 177 IPR022669 GO:0003735|GO:0005840|GO:0006412
Dod02g2334 192 Gene3D Ribosomal protein L2, domain 3 121 192 IPR014726 -
Dod02g2334 192 PANTHER RIBOSOMAL PROTEIN L2 47 180 IPR002171 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2334 Dod-Chr2 51478513 51479392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2334 58 160 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 43.860 2.72e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2334 K02886 - ghi:121226617 290.812