Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2329 ATGTTGAAGGAAGGAACTAACAATGCTGGTGGAAGCTCCAGCAACTGGTCACGTGCCTGCGACACGTGCCGGTCCGCCCCGTGCATAGTGTACTGCCGCGCAGACTCGGCGTACCTGTGCTCCTGCTGTGACGCGCGCATCCACGCGGCAAACAGAGTAGCTTCGCGGCACGAGCGCGTGTGGGTGTGTGAGGCATGCGAGCGTGCACCCGCGGCTTTTCTCTGCAAAGCCGACGCTGCTTCTCTGTGCTCCTCCTGCGACGCCGACATCCACTCTGCCAACCCTCTCGCCAGCCGCCACCACCGTGTCCCTATTCTCCCTATCTCAGGGTACGCTCTCTTTGGTGAAGAAGATCATCACGAACTCAATTGTAATAATAGTAAAAGGTATGAGGAAGAAGAGGGTGATGATGATGAGGCTGAAGCAGCGTCGTGGTTGTTGCCACATCCTGTGAAGATTAGTAACGATGAGACCGAGAGTAATAATGGGTTCTTGTTTGGTGGTGGTGATGAGCGCGATGAGTACTTGGATTTGGACCTTGTGGATTGTAACAACTCGTGTTGTGACAATATTAACTTTGGTACTGTTTATCATGATGATGGTCAGCAACTTAATTATGTGAGTGTTCCTCAACAGAGGAACCATGTGGCTGCCGACAGCGCGGTTCCAGTTCAGATGCAACGACAGTCGCTGCAATTTCAACAGGGGATAGATTTTGACTCCTCAAAAGCGGCTTCCAGTTGCAATGGTTCTATTAGTCAAAGTGTTTCAATTTCATCTCAGGAAGTTGGCGTTGTACCGGAATCAACATTCAGCGATGTCTCAATCTCACACACAAAACCATCAATGGGAACAAGTGACCTGTTTCCTCCAATGCCGATGCCTTCACTTATAACCCCATTGGACAGGGAGGCCAGAGTCCTAAGATACAGGGAGAAAAAGAAGACGAGAAAGTTTGAAAAGAAAATCAGGTATGCCTCAAGGAAAGCCTATGCCGAGACTAGACCCCGAATCAAAGGTCGCTTTGCAAAGAGAACTGATGTGGAAGCTGAAGTGGACCAGATGCTCTCCACAACTCTAATCATGGAGGATGCATATGGCATTGTTCCCTCTTTCTGA 1119 0.4987 MLKEGTNNAGGSSSNWSRACDTCRSAPCIVYCRADSAYLCSCCDARIHAANRVASRHERVWVCEACERAPAAFLCKADAASLCSSCDADIHSANPLASRHHRVPILPISGYALFGEEDHHELNCNNSKRYEEEEGDDDEAEAASWLLPHPVKISNDETESNNGFLFGGGDERDEYLDLDLVDCNNSCCDNINFGTVYHDDGQQLNYVSVPQQRNHVAADSAVPVQMQRQSLQFQQGIDFDSSKAASSCNGSISQSVSISSQEVGVVPESTFSDVSISHTKPSMGTSDLFPPMPMPSLITPLDREARVLRYREKKKTRKFEKKIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMLSTTLIMEDAYGIVPSF* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2329 372 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 15 372 IPR045281 GO:0009909
Dod02g2329 372 ProSiteProfiles CCT domain profile. 303 345 IPR010402 GO:0005515
Dod02g2329 372 Pfam CCT motif 303 345 IPR010402 GO:0005515
Dod02g2329 372 SMART bboxneu5 63 105 IPR000315 GO:0008270
Dod02g2329 372 SMART bboxneu5 15 62 IPR000315 GO:0008270
Dod02g2329 372 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 1 15 372 - -
Dod02g2329 372 CDD Bbox1_BBX-like 19 62 - -
Dod02g2329 372 ProSiteProfiles Zinc finger B-box type profile. 15 62 IPR000315 GO:0008270
Dod02g2329 372 ProSiteProfiles Zinc finger B-box type profile. 58 105 IPR000315 GO:0008270
Dod02g2329 372 CDD Bbox1_BBX-like 62 105 - -
Dod02g2329 372 Pfam B-box zinc finger 60 105 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2329 Dod-Chr2 51243032 51245625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2329 1 372 C2C2-CO-like Transcription Factor Family AT3G02380 52.987 4.65e-120 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Dod02g2329 zf-B_box 4.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2329 - - gmx:100782635 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2329 02 51243032 51245625 Dod01g0308 01 5480215 5482743 PCT