Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2327 ATGGGGATGTCATTGCCAAGAGGGGAAGCTGTTGTGTGTTTTGTGGCACTGTTCTGGTTTTGGAGATCTGCATATGCTTTGCTTTCTCCCAAAGGAGTAAACTTTGAAGTGCAAGCCTTAATGGGCATAAAAGCTTCTCTGGTGGACCCTCATGGTATTTTAGATAACTGGGATGGGGATGCAGTTGATCCATGTAGCTGGAATATGGTCACATGTTCACCTGAAAGCCTTGTGGTTAGCCTGGGCATTCCCAGTCAAAATTTATCTGGTACTCTATCCCCAAGCATAGGAAACCTAACAAACCTTCACAGTGTGGTGCTGCAGCATAACAACATAACTGGACCAATCCCTTCAGAGCTAGGCAAGCTTTCCAAGCTTCAAACTCTTGATCTCTCCACTAACTTCTTCAATGGGGAAATTCCCCGCTCTCTGGGTCACCTGAGAGGCCTCCAATACCTGAGGCTTAATAATAACAGTTTTTCAGGGGCATGCCCAGAGTCACTGGCTAACATGGCCCAGCTTTCTTTTCTTGACTTGTCCTACAACAATCTGAGTGGCCCTGTACCCAGGATTTTGGCCAAATCATTCAGTATTGTTGGAAACCCCCTTGTCTGTGCTTCCAGAAAAGAAACAAACTGCCATGGAATGACACTGATGCCTATGTCCATGGACTTGAACAGTACAGAGAATTCTTTACCATCAGACAGACCAAAAACTCGCAAAATGGCCATCGCCTTTGGTTTGAGTCTGGGATGCCTCTGCTTGATAGTTCTTGGTTTCGGACTTGTTCTATGGTGGAGGCGCAAGCGCAATCAGCAGGCTTTCTCTGATGTTAAGGAGCGGCATCATGAAGAGGTCTACCTTGGAAACTTGAAGAGGTTCCAATTAAGGGAACTCCAGATTGCTACCAACAACTTCAGCAACAAAAATATACTGGGAAAGGGTGGTTTTGGAAATGTCTACAAAGGAGTTCTCACAGACGGCACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCATCGGAGGAGAGATACAATTTCAGACTGAAGTTGAAATGATCAGCTTGGCAGTGCACCGAAACCTACTCAAACTGTACGGATTCTGTGTTACACCAACAGAAAGGCTTTTAGTTTATCCATATATGTCCAATGGCAGTGTTGCTTCCCGTCTCAAAGCTGGTAGGCCAGTGTTGGACTGGGGCACAAGGAAGCAAATTGCCTTAGGAGCAGCAAGGGGACTACTATACCTTCACGAGCAGTGTGATCCAAAGATAATCCATAGGGATGTGAAAGCTGCAAATATACTACTTGATGACTATTGTGAGGCAATAGTTGGGGATTTTGGGTTGGCAAAGCTTTTGGATCACCAAGATTCACATGTCACCACTGCAGTGAGGGGCACTGTGGGCCATATTGCACCAGAATATCTTTCCACAGGGACAATCCTCTGA 1455 0.4577 MGMSLPRGEAVVCFVALFWFWRSAYALLSPKGVNFEVQALMGIKASLVDPHGILDNWDGDAVDPCSWNMVTCSPESLVVSLGIPSQNLSGTLSPSIGNLTNLHSVVLQHNNITGPIPSELGKLSKLQTLDLSTNFFNGEIPRSLGHLRGLQYLRLNNNSFSGACPESLANMAQLSFLDLSYNNLSGPVPRILAKSFSIVGNPLVCASRKETNCHGMTLMPMSMDLNSTENSLPSDRPKTRKMAIAFGLSLGCLCLIVLGFGLVLWWRRKRNQQAFSDVKERHHEEVYLGNLKRFQLRELQIATNNFSNKNILGKGGFGNVYKGVLTDGTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLKLYGFCVTPTERLLVYPYMSNGSVASRLKAGRPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAIVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGTIL* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2327 484 Gene3D Ribonuclease Inhibitor 33 215 IPR032675 -
Dod02g2327 484 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 7 481 - -
Dod02g2327 484 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Dod02g2327 484 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 481 - -
Dod02g2327 484 Gene3D Phosphorylase Kinase; domain 1 275 382 - -
Dod02g2327 484 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Dod02g2327 484 SUPERFAMILY Protein kinase-like (PK-like) 282 481 IPR011009 -
Dod02g2327 484 Gene3D Transferase(Phosphotransferase) domain 1 383 483 - -
Dod02g2327 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Dod02g2327 484 SUPERFAMILY L domain-like 36 198 - -
Dod02g2327 484 ProSiteProfiles Protein kinase domain profile. 306 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2327 484 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Dod02g2327 484 Pfam Protein kinase domain 307 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2327 484 SMART serkin_6 306 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2327 Dod-Chr2 51222197 51224844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2327 1 481 Receptor kinase-like Gene Family AT5G16000 73.085 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dod02g2327 Pkinase 1.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2327 - - gmx:100806650 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2327 02 51222197 51224844 Dod01g0309 01 5496460 5500230 PCT