Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2299 ATGCATGCCCGGGGTTCTAATCTTGGGAATACTGGGAGACAAATACCAAGCCATTCATCATCATCTGCCCCAATCCTGCCTCAGGAGAGAGGTTTTCATTTGAGCCAACAATATGTAGGGTTCTCAACTGACTGGAGGAAGCATCCCATAATCAGCCACTTCCGTTATTTGATTAGAGATAAAATTGCTACAATTCTCGGTTCCGGAATCCATAATGAGCAAGTACAACAGATGGTAACTATTCTGGAAGACCGGCTGTTTAATGATGCTGCTTCACAGGAAGAGTATATGAACCAGGAGACATTGATGCAGCGATTGCAAACTCAAATTGAGAAGTTCTTTGGGACAAGATACAATCAACAACAACTAGATGGCTCTATTATTTCCAATTCTACGACAGTGCCTTCTTCTAGGTTATTGCATTCTTGGTCTAATCGATGTCTAGCAGAACCTACTTTCCAGAATTGGGGTGGTCCTGTTTTTCCAGAGCTGGTAGTTCCACCTGATGAATGGATATCAATCCCTACATGCACGGATAACTTTTCCATTTCCGGTGGTGCAAGAAATATGGATACGAGCTCCAAGCCAACTAATTCCCGATCTCTGCAGCAACATGTGACTGCTTTGGATATGGATTTGATACAATACATAGATTATTTCGGGACTACCCAGAGAAATGAATCTACGGCTTTTCTAAGTACAATGGGAAGATCCCCTCAGTCAGAATATTTAAATTCTCTCACCCCACATCATGTCTCAAGGGAAGTATCGGAAGTGTCTAATCTTTTTCCTAGCATGAGCTCTAACTTTGAGTATTCAAGCCTAGGGGATTTAAGGCAAGATCAGCACCAGAAGTTGGATTCTGAACAGAATTTTAAGCAATTTATGCAGCCTTATGGGCTTCGTGGTAATGCTTCTATGGCCCAGTCAAGTTCATGTTTTGTTGATCAAGGCCAACATCCCTGTCAAATGTTGGGAAAGAAAACATTGAAGCAGCCTCAGCTTCCTACAAGACTTCTCAATGGGGAGAAGCGGTTCACTTCAGAAAGCTTGGTTGGGCGTTTCTGTTTAGGTGCATCTCCTATTGTTAATTCAGGCAATGTTCCAGGCTTAGAAGCTTCAGTTGAACAGAGGATATTGCTTGCATATTTTCGCTACAAGAATCTAAACGTTTCAGGGGATAATCAAATTTCCTTTCCTAAGTATCTCCATTCAGCAGTCTGTGGTAATGGGATGTGTACTTGTGATCGGTCTATCAAGATGTTATTGCATTTGAACAACTGTCAACGTGATGATTGTCAAATATGTTGCTACTGGAAATTATTATGTTTCACTGGTGGTACTCCTGAATCTCATTTGGAATTTACAAATGACAAGATTATTGATTCCATTCAAAACAATATTGATGGCCCTTCTTGTGTCTTTGAAGCCATGCTACCACCTACCAAAAGACTAAAAGTGGAGCCTGCTTTGGGTGTATCTTTAATTGACACTGTAATTTCTGATCCATGGGCTCAGAAGATGGTTCAACCTTATTCTTTGAAGGCACTTTCAGAGATGCAGGAACAGGCAGAATCTTCCCTCTCTTCTGTCTATTCTGAAGTTACAGATTGCAGTGTGGAACAGTTCACAAATCCAATGATTGATTCTGTAAGCATTAGTGAGATAAAGAACGGTGCAACTAATGACACATTTGGACAGACTTTGAAGAGTGAAGATATTCCCTGTGAAGGCTTTGAAGCTGATTATATATCAGAGAAGTCAAAACCAAAAGACCACAAGGTTATTCTCAGCAATAACTTAAAGGAAAATGTCATTAGTGATATAAAGAACAGTGCAACTGATGACACATTTCCACAGATTTCCAAGTGTGATAATATTCCCTCTGAAGGCTTAGAAGCTGATCATATATCAGAGGAGTCAAAACCAAAAGACCATGAGGTTAAAGCCAGCAGTAACTTAATGGAAAATGTCACTAATGAGATAAATAACAGTGCAACTGATGACACATTTGGACAGATGTTTGAGTGTGAAAATGTTCCCTCTGAAGGTTTAGAAGCTGGTCATATATCAGAGGAGCCAAAACCAAAAGACCATGATGTGACAGCCCACAGCAACTTGCAGAAAAATGTCATTAGGTCGAATTCCAACATGCATCCTCTCTCCAAAGATCCTATTGTAGCTGGTATAGAGGACATACAAGGTAGAACTGGGTTCAACCAGGTTGGCAAAAATGCTACGAAGAAAGTCAGTGAACCAAAAGCTGAGCAAGAGAAGGAAACAAATTCCTCAAACGCAGTAGTTAATGGTGTCTCCTTAACTGAGTTTTTCACATGTGATCAAATAAGGGAACACATTATGAGTCTACGAAAGCAATTTGATCAGATTTCAACTGAGGAAGAAAGGGGAATTGCTGCTAACACATGCCAATTATGTGGAATGCAAAAGCTTTTTTTCGCTCCAGTGCCAATTTATTGCTTATGTTGTGGCCTCCGCATCAAGCGAAATAAATACTATTACTACAAAAGAGCAGAGGAGGTTGTTACACAACATTGCTTTTGCACTGCATGCCATAATAATTCTCGAGGTGGATCCATCATGTTCAATGGGATATCCGTTTCCAAGGAACTTCTTGATAAAAAGAAAAATGATGAAGTATTTGAAGAAGCATGGGTTCAATGCGACAAATGCAAAAGTTGGCAACATCAAATATGTGCACTCTATAACAATAAAAGGGATTTGGACTCCAGTGCTGAATATATATGTCCTACATGCCGTTTAAAGGATATTGAAAATGGAATGCATGTACCCTTGCCAAAGACTGCTATTTTTGGTGCTAAGGATTTGCCAAGCACCATGCTTAGTGATCACATAGAGAAAAGACTTTTTAAGTGTCTCATGCAAGAGAAAGAAGACTGGACCAAACAAAAAGGGAATAACAACCTTGATGAGGTTTTAGCAGCAGAGAATCTTTCTGTTAGAGTAGTGCTATCTGTTGACAAACAATTAAAAGTGAAGAAGCAGTTTCTGGACATATTTTTGGAGGAGAATTACCCTGCCGAGTTCCCTTATAAATCACAAGTTATTCTCCTGTTTCAGAAGATTGAAGGAGTAGATGTATGCCTTTTTGGAATGTATGTCCAGGAGTTTGGCTCGGAATGTGGCCGCCCGAATCAGCGCTGTGTATACATTTCATATCTGGATTCTGTTAAGTATTTTAGGCCTGAAAGAGAGACTGTGACTGGAGAAGCTCTTCGTACCTTTGTTTACCATGAAATATTGATTGGATACCTTGATTTTTGCAAGAAACGAGGTTTCACAACTTGCTATATTTGGGCCTGTCCTCCTTTAAAGGGGGAAGATTACCTACTATATTGCCATCCCTACACTCAAAAGACTCCAAAGAATGATAAACTACGGCGCTGGTATCATTCAATGCTAAGAAAGGCTGCTGAAGAAAATATTGTTGTTGGTTTAACCAACATATATGATCATTTCTTTGTTTCTGCCGGAAAATGCAACTCCAAGGTAACAGCTACTCGATTGCCATACTTTGATGGAGACTTCTGGTCTGGTACTGCTATGGATCTAGCTAGGAAAATTGAACAAGAGAACGGAGGAGAGCATGAAAAGACATTGAAAGAACAAGTTTCCAAAAGAACTTTAAAGGCCATGGGATATGTAAATCCTTCGAAAGACACTGCCAAAGACATTATAGTGATGATGAAGTTGGGCCAAACTATATTACCTTTCAAGGAAGACTTCATACTAGTTCACTTGCAATATGAATGCATGCACTGCAATGAAGTGATGGTGTCTGGAAAGCGATGGTTTTGCACTGAATGCAAGAATTTCCAGGAGTGTGAAAGATGCCACACTGCTGACTCACACACTTCAATTAGTGGGGAGAAGCATACACTCTGTCAGGTCCTCATGGATGATATCCCTTATGATACTAAGGAGAATGAGACCATCCTTGATAATGGGTTATTTGAGAGCAGGCACAACTTTTTGAGCTTCTGCCAGAAGAATCAGTTTCAGTTTGACACACTCCGCCGCGCCAAGTATTCCTCAATGATGATCCTATATCATCTGAGGAGTCCTACTCTTCTGGCTGTTGAAACAATATGCAGCATTTGCTGTAAACACAATGCATCCCAACAGAGCTGGAAATGTGGGATTTGCCCGGAGTTCACTGTCTGCTCAACATGTTATCAAGAGAGAGGTGCTAATTGCCATCCACACAAGTTGAATCAGACTTCTTCAACAGCACTATGTCAGTCAGGGAATCAAGAATTGAGGGAGGACTCGGTACTGATTCGGGAGCTGCTGCATGTTTTACGGCATGCCTCTCAATGTCGCTCAGCTAAAACTCGACCATGCTCTTACCCAAACTGTCTCCAAATTAAGAAGCTGTTCTATCATGCCAGCAAGTGCACTGTTCGGACTGCTGGGGGCTGCCAACATTGTAAGAAGACATGGCTGGCACTAACCGTACACTCAAGGAATTGTGTAGACTCGCCATGTTCCATCCCGCGTTGCATGGATCTGAAGAAGCATGCAGAATGGATAGCAATGCAATCTGAATCTAGGCGGAGGGCTGCAGTTGTGGAAAGCATCACAGCCCAATGA 4632 0.4104 MHARGSNLGNTGRQIPSHSSSSAPILPQERGFHLSQQYVGFSTDWRKHPIISHFRYLIRDKIATILGSGIHNEQVQQMVTILEDRLFNDAASQEEYMNQETLMQRLQTQIEKFFGTRYNQQQLDGSIISNSTTVPSSRLLHSWSNRCLAEPTFQNWGGPVFPELVVPPDEWISIPTCTDNFSISGGARNMDTSSKPTNSRSLQQHVTALDMDLIQYIDYFGTTQRNESTAFLSTMGRSPQSEYLNSLTPHHVSREVSEVSNLFPSMSSNFEYSSLGDLRQDQHQKLDSEQNFKQFMQPYGLRGNASMAQSSSCFVDQGQHPCQMLGKKTLKQPQLPTRLLNGEKRFTSESLVGRFCLGASPIVNSGNVPGLEASVEQRILLAYFRYKNLNVSGDNQISFPKYLHSAVCGNGMCTCDRSIKMLLHLNNCQRDDCQICCYWKLLCFTGGTPESHLEFTNDKIIDSIQNNIDGPSCVFEAMLPPTKRLKVEPALGVSLIDTVISDPWAQKMVQPYSLKALSEMQEQAESSLSSVYSEVTDCSVEQFTNPMIDSVSISEIKNGATNDTFGQTLKSEDIPCEGFEADYISEKSKPKDHKVILSNNLKENVISDIKNSATDDTFPQISKCDNIPSEGLEADHISEESKPKDHEVKASSNLMENVTNEINNSATDDTFGQMFECENVPSEGLEAGHISEEPKPKDHDVTAHSNLQKNVIRSNSNMHPLSKDPIVAGIEDIQGRTGFNQVGKNATKKVSEPKAEQEKETNSSNAVVNGVSLTEFFTCDQIREHIMSLRKQFDQISTEEERGIAANTCQLCGMQKLFFAPVPIYCLCCGLRIKRNKYYYYKRAEEVVTQHCFCTACHNNSRGGSIMFNGISVSKELLDKKKNDEVFEEAWVQCDKCKSWQHQICALYNNKRDLDSSAEYICPTCRLKDIENGMHVPLPKTAIFGAKDLPSTMLSDHIEKRLFKCLMQEKEDWTKQKGNNNLDEVLAAENLSVRVVLSVDKQLKVKKQFLDIFLEENYPAEFPYKSQVILLFQKIEGVDVCLFGMYVQEFGSECGRPNQRCVYISYLDSVKYFRPERETVTGEALRTFVYHEILIGYLDFCKKRGFTTCYIWACPPLKGEDYLLYCHPYTQKTPKNDKLRRWYHSMLRKAAEENIVVGLTNIYDHFFVSAGKCNSKVTATRLPYFDGDFWSGTAMDLARKIEQENGGEHEKTLKEQVSKRTLKAMGYVNPSKDTAKDIIVMMKLGQTILPFKEDFILVHLQYECMHCNEVMVSGKRWFCTECKNFQECERCHTADSHTSISGEKHTLCQVLMDDIPYDTKENETILDNGLFESRHNFLSFCQKNQFQFDTLRRAKYSSMMILYHLRSPTLLAVETICSICCKHNASQQSWKCGICPEFTVCSTCYQERGANCHPHKLNQTSSTALCQSGNQELREDSVLIRELLHVLRHASQCRSAKTRPCSYPNCLQIKKLFYHASKCTVRTAGGCQHCKKTWLALTVHSRNCVDSPCSIPRCMDLKKHAEWIAMQSESRRRAAVVESITAQ* 1544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2299 1543 ProSitePatterns Zinc finger ZZ-type signature. 1377 1404 IPR000433 GO:0008270
Dod02g2299 1543 Gene3D - 1258 1307 IPR043145 -
Dod02g2299 1543 SUPERFAMILY RING/U-box 1243 1301 - -
Dod02g2299 1543 CDD PHD_HAC_like 853 925 - -
Dod02g2299 1543 SMART KAT11_2 978 1271 IPR013178 GO:0004402|GO:0006355|GO:0016573
Dod02g2299 1543 PANTHER HISTONE ACETYLTRANSFERASE HAC2 700 1519 - -
Dod02g2299 1543 Gene3D TAZ domain 1427 1541 IPR035898 -
Dod02g2299 1543 MobiDBLite consensus disorder prediction 738 764 - -
Dod02g2299 1543 SMART PHD_3 853 926 IPR001965 -
Dod02g2299 1543 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 943 1370 IPR031162 GO:0004402
Dod02g2299 1543 ProSiteProfiles Zinc finger ZZ-type profile. 1259 1315 IPR000433 GO:0008270
Dod02g2299 1543 Pfam PHD-finger 888 926 IPR019787 -
Dod02g2299 1543 Gene3D - 1372 1423 IPR043145 -
Dod02g2299 1543 Pfam Histone acetylation protein 982 1199 IPR013178 GO:0004402|GO:0006355|GO:0016573
Dod02g2299 1543 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 878 925 IPR013083 -
Dod02g2299 1543 MobiDBLite consensus disorder prediction 7 25 - -
Dod02g2299 1543 MobiDBLite consensus disorder prediction 1 25 - -
Dod02g2299 1543 SUPERFAMILY TAZ domain 1438 1521 IPR035898 -
Dod02g2299 1543 ProSiteProfiles Zinc finger PHD-type profile. 851 928 IPR019787 -
Dod02g2299 1543 SUPERFAMILY FYVE/PHD zinc finger 888 928 IPR011011 -
Dod02g2299 1543 SMART zz_5 1371 1416 IPR000433 GO:0008270
Dod02g2299 1543 SMART zz_5 1258 1303 IPR000433 GO:0008270
Dod02g2299 1543 Pfam TAZ zinc finger 1441 1514 IPR000197 -
Dod02g2299 1543 SMART TAZ_2 1434 1515 IPR000197 -
Dod02g2299 1543 PANTHER CBP/P300-RELATED 700 1519 IPR013178 GO:0004402|GO:0006355|GO:0016573
Dod02g2299 1543 SUPERFAMILY RING/U-box 1353 1416 - -
Dod02g2299 1543 ProSiteProfiles Zinc finger TAZ-type profile. 1433 1517 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2299 Dod-Chr2 50388460 50397284 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Dod02g2299 HAT_KAT11 5.8e-30 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2299 K04498 - gmx:102664049 1505.73