Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2295 ATGTTCCCTTCAACTACTTACAGCACCGGCCCTTACCCTTGTTTCCCTTCATCTTCTTCATACCCTCTTTTCCCTTTTCTTAACCCTGAGAATAATAATAATAATAATAATAATGCTTCTACAAGCAACACCTTCCTTCATGATCCACTTTGTGTTCCCTACATACCAATCCATAATGCTCCAATCCCAGAAGCACTGGCCAATTTGGCGTCAGCTGCTGCAGATACCTTCGGTGCTTCTGCTTCTGCCGCGGCGGCGGTGGCAATGCCCAAACAAGACCCAGGTGGTGGTGGTGGTGCTTACTATGGAGGCATCTCCTGTTTCCTTGCGAAGAAACCGGCGAAGAAAGACAGGCACAGCAAGATTTACACCTCTCAGGGGCTGAGGGACCGAAGAGTGAGGCTCTCCATTGAGATTGCCCGCAAGTTCTTCGATCTCCAAGAAATGCTAGGGTTCGACAAGGCCAGCAACACCCTTGACTGGCTCTTCACAAAGTCCAAGAAGGCAATTAAGGAGCTGGCTAGGAGCAAGGGCAGTGGCAGTGATGAAGGCAACAAGAGCTTCTCCACATCCTCCGATTGTGAAGACTGTGAAGTGGTTTCTGCTGGGACGACCAAGCAACAAGGGCTATTGGATAATTCAAACGACAATTTTTTGGTGGGTGATGCTGCAAAAGAGAGGAAGCTGAAAAGGGCTCAGAAGGAACCTGCTAGTACTAGTACTGCGAGGGCGAAGATGAAGGAGTCAAGGGAGAAAGCAAGAGCAAGAGCAAGGGAAAGGACTAGTAACAAGATGTGCAACAACAACAACAATATCAACAATGGGAGGGTGGTGCAAGGCTTGAAGAAGAAGTGCCCTGCTGCAACTGCAAGTGAAAGCCCTCATCATCATCAAATCCTGCACCAACTGAGGTCACCCCCTCATCACACTCACCACCACCTTGTGGGTGGTGAAGCAGCACCAAGAGATGATTTCAACGTGATTGAAGAATCCATTGTCATAAAAAGGAAGTTAAAGCCATCCATGATGTCCTCTCATCATCACCATCACCAAAACCTTGTCAATTTCCCTATTAAGGAAGTAAGTTTCAACAACAACAACAACAACAGTGATTACCACTCTTTCCCCAATTTGTCACCAATTTGGGATGCTAATGGAGCCACACCTAACCGCTCCAACTTCTGTGCAATAGCCAGCATGAATCTATCTACGGGTATCTATATATATATATATATATATATGTCTCTATATATGTTTCATGAACAGGCTGCTATAAAAGTGCTATTGCTCTTCTTCATACCTGAGATTTTGATGATGTTTACACAGTTCTATGTCTCGATTTTCTTTCTTTCTTTTTCTTTTTCAGGGCTCCAGATCTTTGGAAAGTCTTGGGAGGAGTGCAGCAATCCACGTCTACACTAG 1422 0.455 MFPSTTYSTGPYPCFPSSSSYPLFPFLNPENNNNNNNNASTSNTFLHDPLCVPYIPIHNAPIPEALANLASAAADTFGASASAAAAVAMPKQDPGGGGGAYYGGISCFLAKKPAKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQEMLGFDKASNTLDWLFTKSKKAIKELARSKGSGSDEGNKSFSTSSDCEDCEVVSAGTTKQQGLLDNSNDNFLVGDAAKERKLKRAQKEPASTSTARAKMKESREKARARARERTSNKMCNNNNNINNGRVVQGLKKKCPAATASESPHHHQILHQLRSPPHHTHHHLVGGEAAPRDDFNVIEESIVIKRKLKPSMMSSHHHHHQNLVNFPIKEVSFNNNNNNSDYHSFPNLSPIWDANGATPNRSNFCAIASMNLSTGIYIYIYIYMSLYMFHEQAAIKVLLLFFIPEILMMFTQFYVSIFFLSFSFSGLQIFGKSWEECSNPRLH* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2295 473 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 455 472 - -
Dod02g2295 473 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 25 409 - -
Dod02g2295 473 MobiDBLite consensus disorder prediction 226 249 - -
Dod02g2295 473 ProSiteProfiles R domain profile. 247 264 IPR017888 -
Dod02g2295 473 Pfam TCP family transcription factor 114 267 IPR017887 -
Dod02g2295 473 ProSiteProfiles TCP domain profile. 115 173 IPR017887 -
Dod02g2295 473 MobiDBLite consensus disorder prediction 256 275 - -
Dod02g2295 473 MobiDBLite consensus disorder prediction 174 193 - -
Dod02g2295 473 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 409 IPR005333 GO:0003700
Dod02g2295 473 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 455 472 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2295 Dod-Chr2 50269470 50270891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2295 111 269 TCP Transcription Factor Family AT1G67260 43.023 5.32e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod02g2295 TCP 2.3e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2295 - - gmx:100801549 389.423