Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2270 ATGCGGATGAGCTGTAACGGATGCCGGGTGTTAAGAAAAGGTTGCAGTGAGGATTGTAGCATAAGGCCTTGTCTGCAGTGGATCAAGAGCCCAGAGTCACAAGCCAATGCCACCGTCTTCCTTGCTAAGTTCTATGGCCGTGCTGGCCTCATGAACCTCATCAACGCAGGCCCTGAACACCTTCGTCCTGCGATTTTTCGTTCTTTGCTATATGAGGCATGCGGGCGGATAGTGAACCCGATTTACGGATCAGTGGGTTTGTTCTGGTCGGGGAGCTGGCAACTGTGCCAGTCCGCCGTGGAGGCCGTTTTGAAGGGCGCGCCGATCACGCCGATAAATTCGGACGTGGCGGCCAGCGGGCGGGGCCCACCCTTGAAGGCATACGACATACGCCACGTGTCCAAGGACGAGAACTTCGCCGCGTCGCACGATGATCAGCGAGTCAAGACTCGCTTCCGGTTCAAGCGAACCGCCCCCGCATGCGGCGGAGCCGCTTCAAAAGACGACAAGGGAACCGGAACCGGGTATGTCCCGGTCAAACCGGAACCAGCGCCGAACCGGTCGGCGAGTCACGAGTCATCGCTGAGCCACCAGTCTGAGGCGGCGAACATGGCTGTTACGGCGGCTGCGGCGGTGGAGGGAGAGAGTAAAGAAAGCAAGCAGAGCGAGAGCGATGTGTCCGTGGAGACTTCGGTTCTCTTCCACGACGAACCGGAGTCGGAAGCGAAGGGGAGCGGTCGAGCCGATGAGGGTGCTGACGAGGTCGGTCTGGAGCTGACGCTGGGGTTCGAACCGGCTTCACGTGCGCATCACGTGGTTCCCGTGAAGAAGAGGAGGATTGCGTTGAAGGATCATTGTTGTGGTGTTTCGGGCGAGAACGGCTCGTGCAAGGTGGAGCTAGGGCTTGAGTGCCCGGCTCTGAACGGCTCAGTTTCGACTTAA 942 0.5913 MRMSCNGCRVLRKGCSEDCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLFWSGSWQLCQSAVEAVLKGAPITPINSDVAASGRGPPLKAYDIRHVSKDENFAASHDDQRVKTRFRFKRTAPACGGAASKDDKGTGTGYVPVKPEPAPNRSASHESSLSHQSEAANMAVTAAAAVEGESKESKQSESDVSVETSVLFHDEPESEAKGSGRADEGADEVGLELTLGFEPASRAHHVVPVKKRRIALKDHCCGVSGENGSCKVELGLECPALNGSVST* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2270 313 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Dod02g2270 313 MobiDBLite consensus disorder prediction 187 203 - -
Dod02g2270 313 MobiDBLite consensus disorder prediction 216 251 - -
Dod02g2270 313 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 303 - -
Dod02g2270 313 MobiDBLite consensus disorder prediction 159 251 - -
Dod02g2270 313 PIRSF AS2 1 305 IPR017414 -
Dod02g2270 313 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 303 - -
Dod02g2270 313 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2270 Dod-Chr2 49738116 49739745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2270 1 302 AS2 family AT3G02550 60.458 5.09e-112 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod02g2270 LOB 2.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2270 - - gmx:100786490 408.297