Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2246 GTGTTGCTGGTGGAACTGCATCTGGGAAAACAACCGTGTGTAACTTGATAATTAACCAACTACATGATCGACGTGTTATCCTCATTAATCAAGACTCATTTTACTACTCGCTGAATGACAAGACACTACAGAAAGTTAATGAGTACAACTTTGATCACCCTGGTAAGAACAATAATAAGCTTATGCTTTCATCTTTTGAGAAATTGAAATGGGGACAGGCTGTTACCATACCGAATTATGATATCAAAAGCCATAAGATAATTAAACCAACACGTCAGGTTCATCCTGCAGATATTATAGTTTTTGAAGGGATATTAGTTCTTCACGATTCTCGTGTCCGTGATCTTTTAAACATGAAGATCTTTGTTGATGAAGATTCTGATGTGCGTCTTGCACGGAGGATTCAACGTCTTGCTATTGATCATGGAAGGAACATCCAAAATGTTTTAGACCAATATTCCAGATTTGTAAAGCCCAGTTTCGAAGATTTTGTGTTGCCAACAAAGAAATATGCTGATATTATCATCCCGAGTGGAGGTGATAATGATGTTGCCATTGACTTGATAGTACAAAATATACGCACGAAACTTGGCCAACATGATTTGTGTAAATTATATACAAATATTTTTGTTATGTCTTCAACATTTCAGATAAAAGGAATGCACACTCTCATCCGCGATGCCAGAACAACAAAGCATGACTTTGTCTTTTACTCGGACCGCCTTATCAGGCTGGTTGTTGAGCATGGATTGGGATACCTTCCTTTTAGTGAAAAGCAAGTCATAACACCAACAGGATCTGTGTACCCTGGAGTAGTCTTTTGTAGTAGGCTATGTGGAGTATCAGTCATAAGAAGTGGAGAAAGCATGGAAAATGCAGTAAGAGCATGCTGTAAGGGAATCAAAATTGGAAAAATCCTTATTCTAGGACAGGGCACAGATGGCCGACAGTTAATCTATGAGAAGTTACCATCAGACATTGCAAGTCGCCATGTGTTGCTACTTGATCCGGTTCTAGCAACAGGAAATTCAGCAATCAAAGCTATCTCTCTGCTTCTCAAGAAGGGTGTTCCACAATCCAATATTATCTTTCTAAACTTAATAGCAGCACCACAAGGGATACATGCGGTCTGCGAGCGATTTCCAATGCTAAAACTTGTGACATCAGAGATTGACGCATCAATAAATGAGAATTATCATGTCATCCCTGGCTTGGGAGAGTTTGGCGATCGTTACTTTGCTACTGATCATTAA 1253 0.3911 VAGGTASGKTTVCNLIINQLHDRRVILINQDSFYYSLNDKTLQKVNEYNFDHPGKNNNKLMLSSFEKLKWGQAVTIPNYDIKSHKIIKPTRQVHPADIIVFEGILVLHDSRVRDLLNMKIFVDEDSDVRLARRIQRLAIDHGRNIQNVLDQYSRFVKPSFEDFVLPTKKYADIIIPSGGDNDVAIDLIVQNIRTKLGQHDLCKLYTNIFVMSSTFQIKGMHTLIRDARTTKHDFVFYSDRLIRLVVEHGLGYLPFSEKQVITPTGSVYPGVVFCSRLCGVSVIRSGESMENAVRACCKGIKIGKILILGQGTDGRQLIYEKLPSDIASRHVLLLDPVLATGNSAIKAISLLLKKGVPQSNIIFLNLIAAPQGIHAVCERFPMLKLVTSEIDASINENYHVIPGLGEFGDRYFATDH* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2246 416 Gene3D - 199 414 IPR029057 -
Dod02g2246 416 CDD UMPK 1 195 IPR000764 -
Dod02g2246 416 Pfam Phosphoribulokinase / Uridine kinase family 1 184 IPR006083 GO:0005524|GO:0016301
Dod02g2246 416 SUPERFAMILY PRTase-like 198 414 IPR029057 -
Dod02g2246 416 Gene3D - 1 198 IPR027417 -
Dod02g2246 416 CDD PRTases_typeI 277 387 IPR000836 -
Dod02g2246 416 Pfam Uracil phosphoribosyltransferase 212 414 - -
Dod02g2246 416 PRINTS Uridine kinase signature 141 152 - -
Dod02g2246 416 PRINTS Uridine kinase signature 163 176 - -
Dod02g2246 416 PRINTS Uridine kinase signature 26 37 - -
Dod02g2246 416 PRINTS Uridine kinase signature 71 86 - -
Dod02g2246 416 PRINTS Uridine kinase signature 127 137 - -
Dod02g2246 416 PANTHER URIDINE KINASE 1 412 - -
Dod02g2246 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 188 IPR027417 -
Dod02g2246 416 PANTHER URIDINE KINASE-LIKE PROTEIN 5 1 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2246 Dod-Chr2 49026859 49037946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2246 1 415 PRT Gene Family AT4G26510 70.843 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2246 K00876 - gmx:100803453 662.529