Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2218 ATGGCTGGAATGCTTCCGGGAGTTGAATGTGCTCGAAGGAGACGGTTCCATCAGAGTGGAGGATGCTTTGATTCACCATCTATGGCTACTCATAACCCCACAAGGCGCCCTTCTTTCTGTTTGTATGCAAGCAACCATGACTCTCTTCTTTCCTCATCCTCTTCACTGCATAGAAGCATATTATACCAGGCACACCCAGATGAGAATATGGCAGGAGCAGCCAGAGAAGCCAAACAGAGATTGGATGACAAGTTCAGAACACAAAGGAAAATAGAAAACAAAAGGTCTGAGGAGGGCAGAACAACAAACTTAGCAGAGCTGCATATGGAGGTATATGGGTCAAATAGAAGTTGTTCAAGGAGGTTTAGTTGGACCAAATTGATCTGGAAGGCTTCACAACAAGAGGAGTGTGCCGTGTGCTTGGAGTTATTCAAAGTTGGAGAGACGCTGATGCATCTCCCATGTGCCCATAGGTTCCATTCCAAATGCTTGCAGCCATGGTTCCCTCTTCCATGCGCGCCACCCCTCTGTTCAGCGATCGCGCGAATTGCCCCCCCCCCCCCCCCCCCGGGGCGGCGATTCCGCCTTCCTCCTTTCTCTCCCTTCTTTGTCCGCAAACTCAGCCGCGAGCTCAGCCTCTCAGATCCGCCTTTCTCCTCTCTCAACCGTGAACAGCCTTAA 681 0.5081 MAGMLPGVECARRRRFHQSGGCFDSPSMATHNPTRRPSFCLYASNHDSLLSSSSSLHRSILYQAHPDENMAGAAREAKQRLDDKFRTQRKIENKRSEEGRTTNLAELHMEVYGSNRSCSRRFSWTKLIWKASQQEECAVCLELFKVGETLMHLPCAHRFHSKCLQPWFPLPCAPPLCSAIARIAPPPPPPGRRFRLPPFSPFFVRKLSRELSLSDPPFSSLNREQP* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2218 226 ProSiteProfiles Zinc finger RING-type profile. 137 172 IPR001841 -
Dod02g2218 226 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 1 179 - -
Dod02g2218 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 171 IPR013083 -
Dod02g2218 226 Pfam RING-like zinc finger 136 164 IPR001841 -
Dod02g2218 226 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 179 - -
Dod02g2218 226 SUPERFAMILY RING/U-box 129 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2218 Dod-Chr2 48119459 48120794 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2218 1 86 C3H Transcription Factor Family AT2G15580 49.474 1.69e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2218 - - gmx:100527583 239.965