Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2205 ATGGGAAGACAGCCTTGTTGTGAGAAGGTTGGTTTGAAGAGAGGTCCATGGACAATTGAGGAAGACCACAAGCTAGCGAATTTCATCCTCAATAATGGCATCCATTGCTGGCGAACTGTTCCAAAGCTTGCAGGTCTCCTAAGATGTGGAAAGAGCTGCAGATTGAGATGGATCAACTATCTGAGGCCAGACCTCAAGAGGGGGAGGCTTTACAGAAATGGAAGAGAATCAAATTATACAACTACATTCACGACTTGGTGGTCTAAGATTGCTGCACATTTTCCTGGGAGGACAGACAATGAAATCAAGAATCATTGGAACACAAGAATCAAGAAAAAGTTGAAGCTCCTTGGCCTGGACCCTCTAACCCAGAAGCCAATTGAGCAAAAGGAACAGTCTAATGATGACAAAAATAAGACAAGCCTAGAGACAAATACTTCTAAAGGGTCTGGAGAGAATGTGGAGAATGAGTCCTTGGACAATTATGGCACAGAGGAAATGCCAAAAACAGAAGGGAAAAGAGAAGAAGTTTACAAGGTGAATTGGGATGATGATACCGCTGAACTTCTGAACAATTATGAAATGCTGTGCTCACAGCTGGACTTGGGATTATGGATGACTCAAGATGCCAAAACCAGCACTAGTTCTCACTGTAGTTCTCCTTTCTCTCTGGATGATTCTAGCAATCTTTCTGTGGGTAAATCCCCTTACCTAATTCGGGAAAATTCCTTGCAGCAATGGGTTGGTGCTGGTAGCATGGATTCCATTCCCTCATGGGATAGCTTCAATACTCTTGAACAGGATCTTTTCTTCTTGGAAAACAGGCAATAA 831 0.4296 MGRQPCCEKVGLKRGPWTIEEDHKLANFILNNGIHCWRTVPKLAGLLRCGKSCRLRWINYLRPDLKRGRLYRNGRESNYTTTFTTWWSKIAAHFPGRTDNEIKNHWNTRIKKKLKLLGLDPLTQKPIEQKEQSNDDKNKTSLETNTSKGSGENVENESLDNYGTEEMPKTEGKREEVYKVNWDDDTAELLNNYEMLCSQLDLGLWMTQDAKTSTSSHCSSPFSLDDSSNLSVGKSPYLIRENSLQQWVGAGSMDSIPSWDSFNTLEQDLFFLENRQ* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2205 276 Gene3D - 74 149 - -
Dod02g2205 276 PANTHER MYB DOMAIN PROTEIN 40 2 249 - -
Dod02g2205 276 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dod02g2205 276 CDD SANT 16 61 IPR001005 -
Dod02g2205 276 Pfam Myb-like DNA-binding domain 87 108 IPR001005 -
Dod02g2205 276 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dod02g2205 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Dod02g2205 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 114 IPR017930 -
Dod02g2205 276 Gene3D - 11 67 - -
Dod02g2205 276 ProSiteProfiles Myb-like domain profile. 87 110 IPR001005 -
Dod02g2205 276 CDD SANT 87 108 IPR001005 -
Dod02g2205 276 SMART sant 75 112 IPR001005 -
Dod02g2205 276 SMART sant 13 63 IPR001005 -
Dod02g2205 276 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 249 - -
Dod02g2205 276 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Dod02g2205 276 MobiDBLite consensus disorder prediction 143 160 - -
Dod02g2205 276 MobiDBLite consensus disorder prediction 123 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2205 Dod-Chr2 47245086 47246224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2205 1 133 MYB Transcription Factor Family AT5G16600 70.370 1.43e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod02g2205 Myb_DNA-binding 3.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2205 K09422 - gmx:100819471 394.43