Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod02g2203 | ATGGATTGGAAGATGGTGGAGTTGAAGGTCAAGCACTGGTTGAACGCAGTTAAGGTCGCCGTCGGGACTCTGTTTAACGGCGAGAGGATACTATGCGACCGCGTCTTCGCGACGACGGCAGCAGCTAGGCGGATTCCGGAGTCGTGCTTGTACGAAGCGATCTCGAACCACTGGCCGCAGACCCAGTCAATTCTCGTTCGAATCAACCGCCAACGTTCTGGCTGGGCGGGGTTGTGGCTGGGTGGGCGCAGATTTGCTCTTGGAAGGAGAAGTCTCTTTGATTGGGATGAAGTCCGTGATCTGTGCAAATTGGGAGAATTTTTAGAGTTTCGTGATTGTGATCATTAA | 348 | 0.5287 | MDWKMVELKVKHWLNAVKVAVGTLFNGERILCDRVFATTAAARRIPESCLYEAISNHWPQTQSILVRINRQRSGWAGLWLGGRRFALGRRSLFDWDEVRDLCKLGEFLEFRDCDH* | 116 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod02g2203 | 115 | SUPERFAMILY | Cullin repeat-like | 1 | 64 | IPR016159 | - | |
| Dod02g2203 | 115 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 1 | 52 | - | - | |
| Dod02g2203 | 115 | Gene3D | Exocyst complex component Exo70 | 1 | 68 | - | - | |
| Dod02g2203 | 115 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 1 | 52 | IPR004140 | GO:0000145|GO:0006887 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod02g2203 | Dod-Chr2 | 47072062 | 47072648 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod02g2203 | 1 | 50 | EXO70 exocyst subunit family | AT3G09520 | 54.000 | 5.80e-13 | 62.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod02g2203 | K07195 | - | lja:Lj0g3v0313429.1 | 78.5666 |