Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2191 ATGTCCTCCTCCACTCCACAACACTCACTTTGCAAACAGCGCTACGAGCCCCCATCACCACCTCCACCGCCTTCAGGTGCCTTGGAGGTTGGTGTCATTGTTCGTGACTCTCACGGTATTGCTCAAGTAAAGAGTGTCACTGGCAGCAAAATCCTCTGCATTCTGAAAGCTCACGGAATTGCGCCTAAGATCCCTGAGGATCTGTACCATTTGATCAAGAAGGCAGTGTCGATTAGGAAGTATCTGGAAAGGAACAGAAAGGACAAGGACTCTAATTAA 279 0.4875 MSSSTPQHSLCKQRYEPPSPPPPPSGALEVGVIVRDSHGIAQVKSVTGSKILCILKAHGIAPKIPEDLYHLIKKAVSIRKYLERNRKDKDSN* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2191 92 MobiDBLite consensus disorder prediction 1 27 - -
Dod02g2191 92 Gene3D - 27 62 - -
Dod02g2191 92 Gene3D - 63 92 - -
Dod02g2191 92 PANTHER RIBOSOMAL PROTEIN S15P/S13E 29 91 IPR023029 -
Dod02g2191 92 SUPERFAMILY S15/NS1 RNA-binding domain 46 91 IPR009068 -
Dod02g2191 92 PANTHER 40S RIBOSOMAL PROTEIN S13-1-RELATED 29 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2191 Dod-Chr2 46573832 46574700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2191 4 92 Cytoplasmic Ribosomal Protein Gene Family AT3G60770 66.304 2.94e-34 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2191 K02953 - mnt:21387865 115.161