Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2184 ATGGAGAACAAAACAGCAGCCGGCTCCAACGGGGTTAACCCAACGAGCGGTTTCAACCTCGCCACCAGAACATTTCACACCCTGAGACCCCCTCTCCGCCTCCCTCCTCCTGACTCCGCCGTTTCATCCGCGTTCTACGCTCTCTCCCTCCGCCGCAACTCGCCCTGGCCCGACTCAGTCACCGCCCTCATCGACTCCGCTACCGGCTACCACCTCTCCTACGCCGGGTTCATCCGCCGCGTCGAAACCCTAGCCGCCAATCTCACCTCCCTCTTCAACCTCTCCAAAAACGACACCGCTTTGATCCTCTTACCGAACCTCCTCCACGTCCCCATCCTCTACTTCGCGCTCCTCTCCCTCGGCGTCGTCGTTTCGCCCGTCAATCCACTCACCACGCGGTCCGAGCTCGCGCGCATCCTCCTCCTCAGCAAACCGGCCATCGCATTCGCCACGTCATCAACTGCCGACAAGCTTCCCGACCTCCGGCTTGGAACCGTTCTCCTCGATTCGTCCGAGTTCGTTTCGCTCACGACCACGACGATTCGACCCGGAGCAAGATTCGAGCGGGTGGAGGTGAGTCAATCTGATGTGGCAGCGATTCTTTACTCGTCTGGGACCACAGGGAAGGTGAAGGGCGTGATGCTGACGCACCGGAACCTGATGGCGCTGGCGGCGGCATACGACGCCGTTCGGGCGCAGAGGAAGCAGCCCGCGATGTTCCTCTATACGATACCGTATTTCCACGTGTACGGGTTCACGTTCGCGCTGAGGGCGGTGGTGCTGAAGGACACGGTGGTGTTGATGGAGAGGTTTGGGCTGGGGAGGATGCTGGCGGCAGTGGAGAGGTTCCAAGTGACGCACGTGGCTTCGGCGCCGCCGCTGGTGGTGGCGATGACGAAGGATGGTGCGACGGCGGGGTACGATTTAAGGTCGTTGGAATGCGTCGTTTGCGGCGGGGCTCCGCTTGGAAAGGACACCGCTGCCACATTCAAATCGAAGTTTCCGGGTGTGATGATATTACAGGGATATGGACTAACTGAATCAACGGCTGGGATTGTCCGAACATCCAGTCCGGAGGAGGCTAGCCGACCGGGAACAACAGGTAGATTGGTATCAGGGGTGGAAGCCAAAATTGTGAAGCCAGACACAGGGGAAGCCATGGGTATTGGTGAACAAGGGGAACTTTGGGTCAGAGGACCTTCCATTATGAAAGGTTATGCCGGTGACCCAGAAGCAACTTCTGCAACTTTGGTGGATGGGTGGCTAAGGACAGGGGACCTCTGTTATTTCGATGATGAGGGTTTTTTGTATGTTGTAGACAGGTTGAAAGAGTTAATCAAATACAAGGGCTACCAGGTGGCCCCTGCAGAACTGGAACAGTTGCTCCGGTCACACACTGAGATAATCGATGCTGCAGTTATTCCGTACCCCGATGAAGAAGTCGGTCAAGTGCCCATGGCTTTTGTAGTAAGGCAACTCCAAAGTTCCCTTGGCGAGGCAGAAATAATTGATTTTGTTTCTAAATAG 1527 0.5678 MENKTAAGSNGVNPTSGFNLATRTFHTLRPPLRLPPPDSAVSSAFYALSLRRNSPWPDSVTALIDSATGYHLSYAGFIRRVETLAANLTSLFNLSKNDTALILLPNLLHVPILYFALLSLGVVVSPVNPLTTRSELARILLLSKPAIAFATSSTADKLPDLRLGTVLLDSSEFVSLTTTTIRPGARFERVEVSQSDVAAILYSSGTTGKVKGVMLTHRNLMALAAAYDAVRAQRKQPAMFLYTIPYFHVYGFTFALRAVVLKDTVVLMERFGLGRMLAAVERFQVTHVASAPPLVVAMTKDGATAGYDLRSLECVVCGGAPLGKDTAATFKSKFPGVMILQGYGLTESTAGIVRTSSPEEASRPGTTGRLVSGVEAKIVKPDTGEAMGIGEQGELWVRGPSIMKGYAGDPEATSATLVDGWLRTGDLCYFDDEGFLYVVDRLKELIKYKGYQVAPAELEQLLRSHTEIIDAAVIPYPDEEVGQVPMAFVVRQLQSSLGEAEIIDFVSK* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2184 508 Pfam AMP-binding enzyme C-terminal domain 457 506 IPR025110 -
Dod02g2184 508 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 13 508 - -
Dod02g2184 508 Pfam AMP-binding enzyme 59 448 IPR000873 -
Dod02g2184 508 Gene3D - 444 508 IPR045851 -
Dod02g2184 508 CDD 4CL 53 508 - -
Dod02g2184 508 Gene3D - 37 443 IPR042099 -
Dod02g2184 508 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Dod02g2184 508 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 508 - -
Dod02g2184 508 SUPERFAMILY Acetyl-CoA synthetase-like 56 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2184 Dod-Chr2 46209169 46247264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2184 12 508 Monolignol Biosynthesis Gene Families AT5G63380 51.167 1.01e-175 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2184 - - gmx:100801143 667.537