Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2160 ATGAAAGGTACCTTGACGGGTCTCCTATATTTCACGGGCTTTAATTTCCTATTGACATTCGTTGCTGCGTTCCTCTGTGTGTGGTTTGCACCCACAGCCGCTGGACCTGGAATACCTGAAATCAAAGCTTATCTTAATGGTGTTGATACTCCCAACATGTACGGTGCCACAACATTGTTTGTCAAGATTATTGGAAGCATTGGAGCTGTGTCTGCAGGCCTAGACTTGGGTAAAGAAGGGCCATTGGTACATATTGGCAGCTGCATTGCTTCCTTGCTAGGCCAGGGAGGCCCTGACAACTACCGGATCAAATGGCGGTGGCTGCGATATTTCAATAACGATCGTGACCGCCGTGATCTCATTACCTGTGGTGCTTCTTCAGGGGTTTGTGCAGCCTTCAGGGCCCCGGTTGGTGGAGTCCTCTTTGCTCTTGAAGAGGTGGCAACCTGGTGGAGAAGTGCACTCCTGTGGAGAACATTTTTCAGCACAGCTGTGGTGGTGGTAGTGCTAAGGACCTTCATTGAACTCTGCCACGAAGGGAAATGTGGCCTTTTTGGGGAAGGAGGCTTGATCATGTTTGATGTGAGCAATGTCAGTGTGACGTACCATGTGATGGATATCATCCCTGTTGCACTCATTGGAGTCATTGGCGGGCTATTGGGAAGCCTTTATAACTATCTTCTCCACAAGGTCCTCAGACTCTATAATCTCATCAATCAGAAAGGAAAAATATACAAGCTGCTGCTCAGTCTTTCAGTTGCACTCTTCACATCAGTGTGCCAATATGGTCTTCCATTCCTAGGAACATGCACCCCCTGTAACCCATCACTTCCGGAGTCTGCCTGCCCCACCAATGGAAGGTCAGGAAACTACAAACAATTCAACTGCCCAGGTGGCCACTACAATGACCTTGCCACTCTGCTGCTCACCACAAATGATGATGCTGTTAGAAACATATTCTCAACCAACACTCCTCATGAATACCAACCCACCTCTCTCTTAATTTTCTTTGCACTCTATTGCATATTAGGACTATTCACTTTTGGAATTGCTGTGCCATCTGGGCTCTTCCTCCCTATCATACTTATGGGCTCAGGATATGGCCGCCTTCTTGGCATCGTCATGGGACCTCACACAAACATTGATCATGGTTTGTTTGCAGTTCTTGGTGCAGCCTCCCTCATGGCTGGTTCTATGAGGATGACTGTATCCCTTTGTGTCATCTTCCTTGAACTAACCAACAACCTTCTCCTACTACCTATAACCATGATTGTTCTCCTAATAGCCAAAACTGTTGGGGACAGTTTCAACCCAAGCATCTATGAGATCATACTTCACTTAAAAGGCCTTCCATTCATGGATTCAAATCCCGAGCCATGGATGAGAAACCTCACAGTTGGAGAGCTTGTTGATGTGAAGCCAGCAGTGGTTACCCTCCGTGGAGTAGAAAAGGTGTCCAATATAGTTGAAGCATTGAAAAACACTACACATAATGGTTTCCCTGTGGTGGATGATGGGGTCGTACCTCCAACAAGGCTGGTCAGTGAAGCAACAGAACTTCATGGACTGATTCTTAGAGCACACCTCATTCAGGTGCTGAAGAAGAAGTGGTTCTTGAAGGAGAGAAGGAGAACTGAGGAATGGGAAGTGAGGGAGAAGTTTACATGGGTTGAGCTTGCTGAGAGGGAAGGGAAAATTGAAGAGGTGGCTGTGACAAGGGAAGAAATGGACATGTTTGTTGATCTGCATCCTCTGACCAATACAACACCTTTTACGGTGCTGGAGAGCATATCGGTAGCAAAAGCAATGGTCCTCTTCAGGCAAATAGGACTTCGCCATATGCTTGTTGTACCCAAGTATCAAGCATCCGGGGTATCTCCTGTAATTGGGATCTTGACCAGACAGGATCTACTGGCACACAACATTCTGACAGTGTTTCCTCAGCCTGGCAAAATCAAAAAAGAGGAACTGATGAAGTTCTCCCATCCTAATCATCGAATATCCAAGCAGCTTTCTTGTTGGACAAGCTCACAAGCCTCATTTTTCTATCCCACAATAAGTTTTTTTTTTTTTTTTTTTCGGTTTTCTCGGTTTTGGATTACTTGA 2106 0.4606 MKGTLTGLLYFTGFNFLLTFVAAFLCVWFAPTAAGPGIPEIKAYLNGVDTPNMYGATTLFVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIKWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRTFIELCHEGKCGLFGEGGLIMFDVSNVSVTYHVMDIIPVALIGVIGGLLGSLYNYLLHKVLRLYNLINQKGKIYKLLLSLSVALFTSVCQYGLPFLGTCTPCNPSLPESACPTNGRSGNYKQFNCPGGHYNDLATLLLTTNDDAVRNIFSTNTPHEYQPTSLLIFFALYCILGLFTFGIAVPSGLFLPIILMGSGYGRLLGIVMGPHTNIDHGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFMDSNPEPWMRNLTVGELVDVKPAVVTLRGVEKVSNIVEALKNTTHNGFPVVDDGVVPPTRLVSEATELHGLILRAHLIQVLKKKWFLKERRRTEEWEVREKFTWVELAEREGKIEEVAVTREEMDMFVDLHPLTNTTPFTVLESISVAKAMVLFRQIGLRHMLVVPKYQASGVSPVIGILTRQDLLAHNILTVFPQPGKIKKEELMKFSHPNHRISKQLSCWTSSQASFFYPTISFFFFFFRFSRFWIT* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2160 701 Pfam CBS domain 588 638 IPR000644 -
Dod02g2160 701 Gene3D Clc chloride channel 1 455 - -
Dod02g2160 701 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 5 652 - -
Dod02g2160 701 CDD ClC_6_like 5 453 - -
Dod02g2160 701 Gene3D - 456 645 IPR046342 -
Dod02g2160 701 Pfam Voltage gated chloride channel 19 433 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod02g2160 701 PANTHER CHLORIDE CHANNEL PROTEIN 5 652 - -
Dod02g2160 701 PRINTS Plant CLC chloride channel signature 179 186 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dod02g2160 701 PRINTS Plant CLC chloride channel signature 147 155 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dod02g2160 701 PRINTS Plant CLC chloride channel signature 161 171 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dod02g2160 701 PRINTS Plant CLC chloride channel signature 304 320 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dod02g2160 701 ProSiteProfiles CBS domain profile. 586 652 IPR000644 -
Dod02g2160 701 SMART cbs_1 589 642 IPR000644 -
Dod02g2160 701 SMART cbs_1 475 534 IPR000644 -
Dod02g2160 701 PRINTS Chloride channel signature 402 421 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod02g2160 701 PRINTS Chloride channel signature 384 400 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod02g2160 701 PRINTS Chloride channel signature 126 145 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod02g2160 701 PRINTS Chloride channel signature 62 81 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod02g2160 701 PRINTS Chloride channel signature 352 372 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod02g2160 701 PRINTS Chloride channel signature 440 454 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod02g2160 701 PRINTS Chloride channel signature 31 48 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod02g2160 701 SUPERFAMILY Clc chloride channel 7 455 IPR014743 -
Dod02g2160 701 CDD CBS_pair_voltage-gated_CLC_euk_bac 473 640 - -
Dod02g2160 701 SUPERFAMILY CBS-domain pair 456 639 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2160 Dod-Chr2 44867725 44871976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2160 5 653 Ion Channels AT3G27170 79.661 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2160 K05016 - gmx:100788620 1127.85