Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2090 ATGGCAGAAGAGCCACTTCCCAGAAAGCTCTGCAACTCCAGCGACCCACTTCTCCTTCAATGCGCAGACCTGGTCCTGCCATGGCTAAACCCATCGGAGCTCGCCAATGTCTCCATGACGTGCACATCCCTCTGCAAGGTCTCCATCACCATAACCTCCCGCCGATCCTCCGACGCTTCTAGAAGCTTCGAGAGCCATCCAGTCCCATTTCTCAACAACGTCGACCACCAGCCCTACGCCCACTTCCTCTACACCCCTTCCTTCGTTCTGCCCTCCGCCGCTTCCCACCTCCTGCGTCAACCCTGGGGCTCCTCCTCCGTTCCTCTCGCTTCTTCACCGAGTCGGGTCCCTGCGGAATCGGTGAGTCTGGTGGACGAGTTGGGTCGGAACGCGTTGTCTGGGTGCGACTGCGAGGCTTGTGGCGGTGAGGTTGCGGGTTCGGGCTGTCCTTGTTTGGGCCTAGGTGGGCTGGAGGACGTGGGTAGCGAATGCGGGCCGGGTTGTCGGTGCGGGTTTGAGTGTCGGAACCGGCCGACCCAGAAGGGTGTTGCGGTTCGGGTGAAGATTGTGAGGGATGCGAGGAAAGGGTGGGGTTTGCGTGCTGACCAGTTGATTCGTAAAGAGGAGTTCGTGTTTGAATATGCAGGTGAACTGTTGACAACCAAGGAAGCACAGAGGAGACATCAATACTATGATGAACTTGCATCGCGCGCTCGTTTCTCTTCTGCACTTCTGGTTGTAAGGGAGCATCTTCCATCTGGAAAGGCATGCCTGAGATTGAACATTGATGCCACAAGAATAGGAAATGTTGCCCGCTTTGTGAATCATTCATGCGATGGTGGTAATTTAAGCACAAAGTTGGTTAGAAGTTCAGGAGCTTTGTTCCCCCGCCTTTGCTTCTTTGCTCTGAAAGACATCCAAGAAGATGAAGAGCTTACTTTTAGCTATGGAGAAATCAGGAAAAGGCACGATGGTTTGCCGTGCTTTTGCAATAGCTCTTCGTGCTTTGGAACATTGCCCTCGGAAGACACTTAG 1035 0.542 MAEEPLPRKLCNSSDPLLLQCADLVLPWLNPSELANVSMTCTSLCKVSITITSRRSSDASRSFESHPVPFLNNVDHQPYAHFLYTPSFVLPSAASHLLRQPWGSSSVPLASSPSRVPAESVSLVDELGRNALSGCDCEACGGEVAGSGCPCLGLGGLEDVGSECGPGCRCGFECRNRPTQKGVAVRVKIVRDARKGWGLRADQLIRKEEFVFEYAGELLTTKEAQRRHQYYDELASRARFSSALLVVREHLPSGKACLRLNIDATRIGNVARFVNHSCDGGNLSTKLVRSSGALFPRLCFFALKDIQEDEELTFSYGEIRKRHDGLPCFCNSSSCFGTLPSEDT* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2090 344 ProSiteProfiles SET domain profile. 185 317 IPR001214 GO:0005515
Dod02g2090 344 Pfam SET domain 196 317 IPR001214 GO:0005515
Dod02g2090 344 ProSiteProfiles Post-SET domain profile. 324 340 IPR003616 -
Dod02g2090 344 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 17 333 - -
Dod02g2090 344 SUPERFAMILY SET domain 66 337 IPR046341 -
Dod02g2090 344 Gene3D SET domain 50 339 IPR046341 -
Dod02g2090 344 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 17 333 - -
Dod02g2090 344 SMART set_7 185 323 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2090 Dod-Chr2 40370907 40374292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2090 163 339 C2H2 Transcription Factor Family AT2G23740 32.620 3.71e-22 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod02g2090 SET 6.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2090 K11433 - gmx:100786871 494.197