Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2087 ATGTCTGAGTCACAAGGCGGTGATGGCACTTCTGGAACCAATAGGCGTAGAGGCAATGCTGGAAAGCGTGCTGCGACGCAAGAGGGAGCAGCACCATCGCCGGCAACACCATGCGGAGCTTGCAAATTCTTGAGGAGGAAGTGCGTTGGTGGGTGCATCTTTGCACCCTACTTCGGTTCGGACCAGGGTGCAGCCAGGTTCGCAGCGGTGCACAAGGTGTTTGGTGCGAGCAATGTGTCAAAGCTCTTGTTGCATATACCGGCGAATCGCCGCCAGGAAGCCGTGGCTACCATATCTTATGAAGCTCAGGCAAGGCTGTCTGATCCAGTTTATGGTTGTGTATCCACCATTCTTGCTTTGCAGCAACAGGTGGCTTCTTTGCAAGCAGAGGTCGCTATGACACAAACTCAGCTAGTGAATGGTAGGATTGCATATGCAAGTGCTCTAGAGAACACACAGCAGCATCTACAGCAGGCAAACATCAATTTGGGATTGCAGCCAGCATACTCAAACAATTCATCTGCGTCCACTAACCTTATGAATGTGAACAACTTCAGCCTTGGTTTTGACCTTGCAACTGGAGACAGCACCCTCATCATCACAATACCTACAACCTCTTAG 621 0.5072 MSESQGGDGTSGTNRRRGNAGKRAATQEGAAPSPATPCGACKFLRRKCVGGCIFAPYFGSDQGAARFAAVHKVFGASNVSKLLLHIPANRRQEAVATISYEAQARLSDPVYGCVSTILALQQQVASLQAEVAMTQTQLVNGRIAYASALENTQQHLQQANINLGLQPAYSNNSSASTNLMNVNNFSLGFDLATGDSTLIITIPTTS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2087 206 MobiDBLite consensus disorder prediction 1 35 - -
Dod02g2087 206 PANTHER LOB DOMAIN CONTAINING PROTEIN 17 184 - -
Dod02g2087 206 ProSiteProfiles LOB domain profile. 36 138 IPR004883 -
Dod02g2087 206 MobiDBLite consensus disorder prediction 1 17 - -
Dod02g2087 206 Pfam Lateral organ boundaries (LOB) domain 37 135 IPR004883 -
Dod02g2087 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 17 184 - -
Dod02g2087 206 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2087 Dod-Chr2 40312805 40314596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2087 1 192 AS2 family AT3G03760 60.000 5.44e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod02g2087 LOB 7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2087 - - aprc:113866578 255.373