Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2072 ATGGACAGGCTCATAAGGTTAGACCCATCAAACATAGTCCCAATCAGGGTTGAACCAGGGCAGAAATGCACCGGAAGGATAACGTTGCGCAATGTCATGTACACCATGCCTGTGGCTTTCAGGCTTCAGCCACTGATCAGGACCCGTTACACAGTGAAGCCCCAGTCAGGGATCATATCCCCTTTGGCCTCAGTCACTCTAGAGATAATCTACCATCTCCCGCCGGGTTCAAACCTCCCCCACTCTTTCCCACACACAGACGACTCTTTCCTTCTGCACAGTGTTGTAGTCCCTGGTGCCACCATCAAAGAGCCTTCCTCAATGTTCGATGCCGTTCCCAGCCATTGGTTCACCACCAAAAAGAAGCAAGTCTTCATCGACAGTGGAATCAAAATCATGTTTGTTGGGTCACAGATTCTGGCCCAGCTCGTCGCTGATGGTTCAATGGATGAGATCAGAGAGGTGCTTGAACGAAGCGACCCATCGTGGAAGGCTGTTGACTCGACGGACCCACAAGGCCAAAGCTTACTTCACTTGACAATTTCACAACGAAGAGCAGATCTCGTTCAATTGCTCCTCGAATTCGAGCCTGACGTCGAAGCTCCAAGCCGTTCTGGCTCAACACCGCTTGAGGCCGCATCTTTGTCAGGAGAGGCCTTAATCGTTGAGCTTCTTTTAGCTCACAGGGCCAACCCGGAACGCTCGGGATCATCAATGTTTGGGCCAATACATTACGCAGCTAGAGGGGGACACGTGGAGGTTCTGAGGCTTCTCTTGCTCAAAGGTGCCAAGGTGGATGCACCCACAAGAGACGGCAACACAGCCTTGCACCTTGCCGTTGAAGAGCGTAGAAGAGACTGCGCTAGACTGCTATTGGCAAACGGGGCCAGAACCGATTCCCGAAACGCAAGGGAAGGGGACACACCTCTGCACATAGCGGCAGCCACAGGAGACGACAGCATGGTCAAGCTCTTGCTGCAAAAGGGTGCCAACAAAGATGTGAGGAACGGACAGGGGAAGACTGCATACGATGTTACAGCCGAGAATGGACATGCGCGTTTATTCGATGCGCTGCGTTTGGGGGACAATTTGTGTGTGGCTGCGAGAAAAGGGGAGGTGAGGACAATCCAGAAGCTTCTAGAGAGTGGCGCAGCAATCAATGGGAGGGACCAACATGGCTGGACAGCACTGCACAGAGCATGCTTCAAAGGGAGAATGGATGCAGTTCGGGTTCTGGTGGAGAAAGGGATCGATGTGGATGCGAAGGAAGAGGATGGGTACACTGCGTTGCATTGTGCGGCTGAGTCAGGTCATGCGGATGTGACTGAGTTTCTCGTGAAGAAAGGTGCGGATGTTGAGGCCAGAACCAGCAAGGGTGTGACTGCGTTACAGATAGCAGAGTCGTTGCACTACGTGGGGATCACGAGGATTCTTGTTAATGGTGGGGCTAGCAGGGACAGTGTGGCTCAAATACCAGCGCCGGCTCCGATTCCTTTTGGGAGAAAGATGGAAGATGGAAGTACGATGAAGAAGAAAAAGAAGATGGCTAGAACCAGAATGGTAAGGGGAAGCTTTGATCTTTCAGCGGCATTGGCTGTGCTCTAG 1605 0.524 MDRLIRLDPSNIVPIRVEPGQKCTGRITLRNVMYTMPVAFRLQPLIRTRYTVKPQSGIISPLASVTLEIIYHLPPGSNLPHSFPHTDDSFLLHSVVVPGATIKEPSSMFDAVPSHWFTTKKKQVFIDSGIKIMFVGSQILAQLVADGSMDEIREVLERSDPSWKAVDSTDPQGQSLLHLTISQRRADLVQLLLEFEPDVEAPSRSGSTPLEAASLSGEALIVELLLAHRANPERSGSSMFGPIHYAARGGHVEVLRLLLLKGAKVDAPTRDGNTALHLAVEERRRDCARLLLANGARTDSRNAREGDTPLHIAAATGDDSMVKLLLQKGANKDVRNGQGKTAYDVTAENGHARLFDALRLGDNLCVAARKGEVRTIQKLLESGAAINGRDQHGWTALHRACFKGRMDAVRVLVEKGIDVDAKEEDGYTALHCAAESGHADVTEFLVKKGADVEARTSKGVTALQIAESLHYVGITRILVNGGASRDSVAQIPAPAPIPFGRKMEDGSTMKKKKKMARTRMVRGSFDLSAALAVL* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2072 534 Pfam Ankyrin repeats (3 copies) 364 455 IPR002110 GO:0005515
Dod02g2072 534 Pfam Ankyrin repeats (3 copies) 243 336 IPR002110 GO:0005515
Dod02g2072 534 Pfam Ankyrin repeats (3 copies) 159 233 IPR002110 GO:0005515
Dod02g2072 534 ProSiteProfiles Ankyrin repeat region circular profile. 271 302 - -
Dod02g2072 534 ProSiteProfiles Ankyrin repeat region circular profile. 305 336 - -
Dod02g2072 534 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 1 534 - -
Dod02g2072 534 Gene3D - 135 359 IPR036770 -
Dod02g2072 534 ProSiteProfiles Ankyrin repeat profile. 305 337 IPR002110 GO:0005515
Dod02g2072 534 ProSiteProfiles Ankyrin repeat profile. 238 270 IPR002110 GO:0005515
Dod02g2072 534 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 135 IPR000535 -
Dod02g2072 534 SUPERFAMILY Ankyrin repeat 166 487 IPR036770 -
Dod02g2072 534 Gene3D - 360 429 IPR036770 -
Dod02g2072 534 ProSiteProfiles Ankyrin repeat profile. 425 457 IPR002110 GO:0005515
Dod02g2072 534 PRINTS Ankyrin repeat signature 441 455 IPR002110 GO:0005515
Dod02g2072 534 PRINTS Ankyrin repeat signature 306 321 IPR002110 GO:0005515
Dod02g2072 534 Pfam MSP (Major sperm protein) domain 5 108 IPR000535 -
Dod02g2072 534 ProSiteProfiles Ankyrin repeat profile. 205 237 IPR002110 GO:0005515
Dod02g2072 534 SMART ANK_2a 238 267 IPR002110 GO:0005515
Dod02g2072 534 SMART ANK_2a 271 300 IPR002110 GO:0005515
Dod02g2072 534 SMART ANK_2a 205 234 IPR002110 GO:0005515
Dod02g2072 534 SMART ANK_2a 359 388 IPR002110 GO:0005515
Dod02g2072 534 SMART ANK_2a 305 334 IPR002110 GO:0005515
Dod02g2072 534 SMART ANK_2a 425 454 IPR002110 GO:0005515
Dod02g2072 534 SMART ANK_2a 172 201 IPR002110 GO:0005515
Dod02g2072 534 SMART ANK_2a 458 487 IPR002110 GO:0005515
Dod02g2072 534 SMART ANK_2a 392 421 IPR002110 GO:0005515
Dod02g2072 534 Gene3D - 430 480 IPR036770 -
Dod02g2072 534 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED 1 534 - -
Dod02g2072 534 ProSiteProfiles Ankyrin repeat region circular profile. 425 455 - -
Dod02g2072 534 SUPERFAMILY PapD-like 2 150 IPR008962 -
Dod02g2072 534 ProSiteProfiles Ankyrin repeat region circular profile. 238 267 - -
Dod02g2072 534 Gene3D Immunoglobulins 1 134 IPR013783 -
Dod02g2072 534 ProSiteProfiles Ankyrin repeat region circular profile. 205 231 - -
Dod02g2072 534 ProSiteProfiles Ankyrin repeat region circular profile. 392 424 - -
Dod02g2072 534 ProSiteProfiles Ankyrin repeat profile. 271 303 IPR002110 GO:0005515
Dod02g2072 534 ProSiteProfiles Ankyrin repeat profile. 392 424 IPR002110 GO:0005515
Dod02g2072 534 ProSiteProfiles Ankyrin repeat profile. 172 204 IPR002110 GO:0005515
Dod02g2072 534 ProSiteProfiles Ankyrin repeat profile. 364 391 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2072 Dod-Chr2 39435129 39436847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2072 307 486 Ion Channels AT4G32500 28.571 1.36e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2072 - - gmx:100782444 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1993 01 55640225 55641838 Dod02g2072 02 39435129 39436847 PCT