Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2055 ATGACCTCAAAGGGTTTAAGGGACAGAAGGGTGAGGCTTTCTGTCACCACCGCCATTCAGTTCTATGATCTCCAAGACCGCTTGGGCTATGACCAGCCAAGCAAGGCTGTTGAGTGGCTAATCAAGTCAGCTTCAGATGTAATTGCTGAGCTCCCTTCATTGAACACCACATTCCCTGACACACCTAAGCAACCAAGCGATGAGAAGAGGGCTAGTGTGGGAACCGAGCAAGGGTTTGATTCAGCTGATGCAGAGCTTGATGGGGAGGGTAACTACAGCCATCAGCAGAACCAAAGCCAGAACCTTTCCTTGTCCAAATCTGCTTGCAGCAGCACTTCTGAGACAAGCAAAGGCTCTGGCTTGTCGCTCTCAAGGTCTGATATCCGTGTCAAGGCCAGAGAGAGGGCAAGGAAGAGAGCAGCCAAGGAGAAGAAGAAGGACACAAACAACAACAATGAGCCTCATCATCAGATCAATGCTCATCACCAAATGAACCCCATTTCTCAAACAGCTTCATTCACTGAGCTTCTAACTGTTGGGATCAACAACGCAGTTCCAACCACTACTAGTCCAACTGGGTCAATTCATCAGAACCATGGGAGTGATGAGCCTAATCTGTTCAACAAAGCAGCAAGACAACAACAACAACAGCAACAACAACAACAATGGGTTTCAGCACCAACTGCCATGGACTACTTCAGCCCAGTGCTTCTGGGGCCTTCTTCATCTTCAAGAACCCAACAACAGCACCACCACCACCACCACCACAACAACCATTCTTGTTCCTCTGCAGGGTTCTCAGCATCACAAATCCAACTGGGGCATTCCCTTGCTGAGGCCATGTCGTTCAATGTGAGTGGTGGTGGTGATCAGAATCACTCATCGGATCAGCTGCAGCAGCACTTTTCCTTCATCCAGTGA 921 0.4908 MTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSASDVIAELPSLNTTFPDTPKQPSDEKRASVGTEQGFDSADAELDGEGNYSHQQNQSQNLSLSKSACSSTSETSKGSGLSLSRSDIRVKARERARKRAAKEKKKDTNNNNEPHHQINAHHQMNPISQTASFTELLTVGINNAVPTTTSPTGSIHQNHGSDEPNLFNKAARQQQQQQQQQQWVSAPTAMDYFSPVLLGPSSSSRTQQQHHHHHHHNNHSCSSAGFSASQIQLGHSLAEAMSFNVSGGGDQNHSSDQLQQHFSFIQ* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2055 306 MobiDBLite consensus disorder prediction 185 264 - -
Dod02g2055 306 MobiDBLite consensus disorder prediction 90 123 - -
Dod02g2055 306 ProSiteProfiles TCP domain profile. 1 51 IPR017887 -
Dod02g2055 306 MobiDBLite consensus disorder prediction 185 228 - -
Dod02g2055 306 Pfam TCP family transcription factor 1 146 IPR017887 -
Dod02g2055 306 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 306 IPR005333 GO:0003700
Dod02g2055 306 MobiDBLite consensus disorder prediction 284 306 - -
Dod02g2055 306 ProSiteProfiles R domain profile. 126 144 IPR017888 -
Dod02g2055 306 MobiDBLite consensus disorder prediction 53 160 - -
Dod02g2055 306 PANTHER TRANSCRIPTION FACTOR TCP24 1 306 - -
Dod02g2055 306 Coils Coil 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2055 Dod-Chr2 38383967 38384887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2055 1 255 TCP Transcription Factor Family AT4G18390 40.942 7.09e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod02g2055 TCP 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2055 - - tcc:18596471 263.848