Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2047 ATGGAAATTCAATCCCAGCAACCAAAGCAACACAAGAGAGGTGGCACATCTATCTGCAGAGGAGGCAAATTCAAAGGGAGAAACAGAAAAAATAACACAAACAAGTTTGTTGGGGTGAGACAAAGACCTTCAGGGAGGTGGGTTGCAGAGATCAAAGACACAACACAGAAGATAAGAATTTGGCTTGGCACATTTGAGACTGCAGACGAGGCAGCCAGAGCTTATGATGAAGCCGCATGCCTCCTTCGCGGGTCCAACACTCGCACCAACTTCATCACTCATGCATCCTTTGATTCTCCTCTTGCTTCTCGGATTCGAAATCTTCTTAACAGCAGAAAAGGCAACAAACAAAAGGAGGAAGCGGATGCAAATTCCACAAGTGTCAAAAGCACCACGCGCAGTGCTAATAGCACTAGTAGTATTAATTCAAGCAATAATGAGAGCAGTGATAACTCACTCTCTACTTCCAGTATTGGGACAACCCAAAACATGCAACTATTTGATGATGCCTATAGACCAGATTTGAGCAATTTCAGGGAAGCACTTGAGTCTGGTCACCAGTACTCGAATCTTTCATGGGGCTACGGACCTGTTTTTGATCAGTTTCCTTTTGCTCATGTGTCTGATATAACACCGAAGCCTGAAGGCCTTGCTGAAGCAGCTGAGTTGGAGATCTCAGAATTTGAAAGGATGAAAGTTGAAAGTCAAATATCAGCTTCACTTTATGCACTTAATGGGGTTCAAGAGTACATGGAAGCTGTTCATGACTCTAGTGAAGCTCTCTGGAATCTTCCACCTTTGTGCTCATCTTTCTCTTGA 819 0.4383 MEIQSQQPKQHKRGGTSICRGGKFKGRNRKNNTNKFVGVRQRPSGRWVAEIKDTTQKIRIWLGTFETADEAARAYDEAACLLRGSNTRTNFITHASFDSPLASRIRNLLNSRKGNKQKEEADANSTSVKSTTRSANSTSSINSSNNESSDNSLSTSSIGTTQNMQLFDDAYRPDLSNFREALESGHQYSNLSWGYGPVFDQFPFAHVSDITPKPEGLAEAAELEISEFERMKVESQISASLYALNGVQEYMEAVHDSSEALWNLPPLCSSFS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2047 272 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Dod02g2047 272 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Dod02g2047 272 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Dod02g2047 272 Gene3D AP2/ERF domain 34 93 IPR036955 GO:0003700|GO:0006355
Dod02g2047 272 CDD AP2 35 91 IPR001471 GO:0003700|GO:0006355
Dod02g2047 272 MobiDBLite consensus disorder prediction 1 32 - -
Dod02g2047 272 Pfam AP2 domain 35 84 IPR001471 GO:0003700|GO:0006355
Dod02g2047 272 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Dod02g2047 272 SUPERFAMILY DNA-binding domain 35 92 IPR016177 GO:0003677
Dod02g2047 272 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 20 259 - -
Dod02g2047 272 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 20 259 - -
Dod02g2047 272 MobiDBLite consensus disorder prediction 111 158 - -
Dod02g2047 272 MobiDBLite consensus disorder prediction 124 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2047 Dod-Chr2 38055976 38056794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2047 30 271 AP2-EREBP Transcription Factor Family AT5G19790 43.243 4.67e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod02g2047 AP2 1.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2047 K09286 - gmx:100796898 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1969 01 55228880 55229713 Dod02g2047 02 38055976 38056794 PCT