Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2029 ATGGAAGAGCCAGTTGTGCTGAACAAAGAAGGAGAACCTTTGGATTTGCCTCCAGGTTTCAGGTTCCACCCCACCGATGAGGAGATCATCACTTACTATCTGACGGAGAAGGTGATTAATAACAGTTTAAGTGCAACTGCTATTGGGGAAGCTGATTTGAATAAATGTGAGCCTTGGGACTTACATAAGAAAGCCAAGGTAGGAGAGAAAGATTGGTATTTCTTCTGCCAAAGAGATAAGAAGTATCCCACAGGTATGAGAACTAATAGAGCAACTCAATCCGGGTATTGGAAGGCTACCGGAAAAGACAGAGAGATTTATAAAGGAAAAGGCAATCTGGTAGGGATGAAGAAGACCCTTGTCTTCTACAGAGGAAGAGCTCCAAAGGGAGAGAAGACCAATTGGGTTATGCATGAATTCAGATTGGAAGGCCAATTCACAAGTTACAACCTCCCTAATGCCGCAAAGCATGAATGGGTTGTCTCCAGGATTTTCCACAAGAACACAGATGCTAAAAAGACCCCGCTTCCGGGCCCTTTAAGGATGAACTCAATTGGGGATGACTTACTGGATTTTTCTTCTCTCCCACCTCTCATGGATCCTTCTTATGGCAACACCAGCTGGACTTCAGGCTGCAGTGACGACGACTTCAAGGGGACTAACCCAACATCAGATGGCTACTATCTTCCAAGTGCCTTCATCAACAACAATCAACTTCAGATGCTGGTCAAGCCAGAAGACCACATAAACTATGAGATTCCCACTCCCACCAATAGCTATGCTTTCGACCAAGTGAATCTCAGTAATCTAATGGGTGGCACACTTTCTCAGCCTCAAATTCGAGTCCAGAACCGAAGCTCCACCTTCCAGAAGAACATGTTGTCAGATTATTTCATTCTGCCAAACAAGAACGAAGATCAGGCTATTCTACGAGCATTAGCAGTCGAGAAAGAGTACATTTCTGGATTGGACGACAAACCGCGCAACATGGAGCAGTTCTCTTCTAACCAGTCCGTGCATGTCAGCGTCTCCCAGGACACGTGCCTGAGCAACGACAAAAACAGTGACTCATCCTCGAATGTCTCGAAGCAAGACCTGGGAAGGAATAGAGCATTGTACGAGGATCTTGAGGGTCCATCATCAGTTGCCCCTCTCTCTGACTTGGAATGGCGCCCGTGGGATGACTAA 1188 0.4604 MEEPVVLNKEGEPLDLPPGFRFHPTDEEIITYYLTEKVINNSLSATAIGEADLNKCEPWDLHKKAKVGEKDWYFFCQRDKKYPTGMRTNRATQSGYWKATGKDREIYKGKGNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGQFTSYNLPNAAKHEWVVSRIFHKNTDAKKTPLPGPLRMNSIGDDLLDFSSLPPLMDPSYGNTSWTSGCSDDDFKGTNPTSDGYYLPSAFINNNQLQMLVKPEDHINYEIPTPTNSYAFDQVNLSNLMGGTLSQPQIRVQNRSSTFQKNMLSDYFILPNKNEDQAILRALAVEKEYISGLDDKPRNMEQFSSNQSVHVSVSQDTCLSNDKNSDSSSNVSKQDLGRNRALYEDLEGPSSVAPLSDLEWRPWDD* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2029 395 PANTHER NAC DOMAIN-CONTAINING PROTEIN 87 8 318 - -
Dod02g2029 395 MobiDBLite consensus disorder prediction 344 395 - -
Dod02g2029 395 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Dod02g2029 395 ProSiteProfiles NAC domain profile. 16 167 IPR003441 GO:0003677|GO:0006355
Dod02g2029 395 SUPERFAMILY NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Dod02g2029 395 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Dod02g2029 395 MobiDBLite consensus disorder prediction 344 366 - -
Dod02g2029 395 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2029 Dod-Chr2 37524699 37526817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2029 1 222 NAC Transcription Factor Family AT5G18270 67.965 7.61e-108 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod02g2029 NAM 8.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2029 - - aprc:113861501 515.768