Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2006 ATGGACATGATTCTGGGTCTACTCAAACTTCGTGTTAAAAGAGGCATTAATCTCGCAATTCGTGATGCCTGTTCCAGTGACCCCTATATTGTTGTCAACATGGGTGAACAGAAGCTGAAGACTCGAGTCATGAAAAACAATATAAATCCTGTGTGGAATGAAGAATTGACCTTTCCCATCAAGGATGCCAAAACACCCATACGCCTGACAGTTTATGACAAAGACACTTTCTCGGTTGACGACGAAATGGGTGATGCTGACATAGACATAAAACCATATGTTCAGTGTGTGCAGATGGGGTTGGACAACCTCCCAAATGGCTGTGCAGTCAAGAGGATTCAACCAAATAGGACAAACTGCCTCTCTGAAGAGAGCAGCTGCATTTGGCACAATGGAACTATAATCCAAGAAATGATTTTAAGATTGAGAAATGTTGAGTGTGGCGAGGTAGTTGTGGAAATTCAATGGGTAGATATTCCAGGTTGCAAGGGCTTATCAGAGGTAGAATTTTAA 513 0.4211 MDMILGLLKLRVKRGINLAIRDACSSDPYIVVNMGEQKLKTRVMKNNINPVWNEELTFPIKDAKTPIRLTVYDKDTFSVDDEMGDADIDIKPYVQCVQMGLDNLPNGCAVKRIQPNRTNCLSEESSCIWHNGTIIQEMILRLRNVECGEVVVEIQWVDIPGCKGLSEVEF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2006 170 CDD C2_ArfGAP 5 148 - -
Dod02g2006 170 PRINTS C2 domain signature 22 34 IPR000008 -
Dod02g2006 170 PRINTS C2 domain signature 67 75 IPR000008 -
Dod02g2006 170 PRINTS C2 domain signature 46 59 IPR000008 -
Dod02g2006 170 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Dod02g2006 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Dod02g2006 170 Gene3D C2 domain 5 163 IPR035892 -
Dod02g2006 170 SMART C2_3c 7 102 IPR000008 -
Dod02g2006 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 163 - -
Dod02g2006 170 Pfam C2 domain 7 92 IPR000008 -
Dod02g2006 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 91 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2006 Dod-Chr2 35862084 35864405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2006 38 166 C2H2 Transcription Factor Family AT1G70790 67.176 7.14e-62 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2006 - - gmx:100788395 283.878