Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2003 ATGTTGGCCTCCACTGTCCTAACATCCCCTAAACTCAACCTTTCGGGTTTCTTCCCTCCGCACGCATCGAACTCCATCGCAGAAATTAGTCCAAGAACCCCGAGAAGCAGAGTGGCAATATTTGGCAAATCAAATTCCAAAATTGCTGTGGTTGCCAGGGTCAGTAGTAACGGTCGCGATGGTGCCGTTGATGCTACCTCACAGCACTCTTCACCCCCTTCAGATATTGATGCTGCAGAGAATACATCTTCTGGATTTGGTGATGGTTATGTGGCCTTATTTGTTCGTATGTTAGGCCTGGATCATGATCCTTTGGATAGAGAACAGGCTATAGTTGCTCTCTGGAAATATTCCCTTGGTGGAAAGAAGTGCATTGACACTATAATGCAGTTTCCTGGTTGTATTAATCTTGTTGTGAACCTCCTTAGATCAGAGTCTAGTTCAGCATGTGAGGCAGCTGCAGGGCTTCTGCGATCACTATCTTCGGTCAATCTATATAGGAACTCTGTAGCAGACAGTGGAGCAATAGAAGAAATAAATAGATTATTGAGGCATTCATCCTTGGGTCCTGAGGTGAAGGAGCAGAGTATGAGTACTATCTGGAATTTATCTGTTGATGAGAAACTTCGCATTAGAATTTCAGAGAGTGATATTCTGCTGTTATCTATTAAATACCTCGATGATGAGGATATGAAAGTGAAGGAAGCTGCAGGAGGCATTTTGGTAAATTTAGCGTTGAGTTGTGTTAACCACAATGCAATGGTTGAAGCAGGTGTTATACCAAAATTGGCAAAGTTCTTAACGTCTAATTTGGAAGGATCTAAAGTTATTAAACAGGAAGCAAGGAATGCATTGTTGGAACTTGCTAAGGATGATTACTATAGAATTCTTGTTATTGAAGAAGGTCTGGTTCCTGTGCCATTAATAGGTGCTGCAGCATATAAGTCATTCACCCCAGGTTTACATGTGTGGCCCACATTACCAGATGGTACTGAAATTGAAAGGACTTCTAGACAACCTTCCAGATTTGGTGCATCAGAATTACTTCTTGGACTAAATATTGACGTCAAGAATGCTAACATAGAGGAAGCAAAAATCAATGCAATAGTTGGACGGACACAACAGCAATTCCTTGCTCGTATTGGGGCCATGGAAATGGAAGAGAAGACAGTATCTCATTATGAATGCTCAATTGATCAGCGACTTACACTTCTACCTTGGATGGATGGTGTTGCTCGTTTGGTACTAATGTTAGAACTTGAAGATAAGTCTGCAATTATAAGGGCTGCAGAGTCAATTGCTGGTTCATGTATCAATGAACATATGTGTATTGCATTCAAGGAGGCTGGAGCAATTAAGCATTTAGTACGGCTTTTGAATTGTGATCATAATGCGGTCCAATTGGCGGTGACACAAGCTTTGGAAAGGCTGTCTGTTAGCAATGTTGTTTGTTGGGTGATTGAAGGTGAGGGTGCTTTAGGTCCTTTAGTCAGTATTTTGAAATGCTCAGAGATAACTGGACCTGTTGTGGACAAGTCATTGAACATACTTGCTCGGATACTAGACCCCACTAAAGAGATGCAAATGAAGTTTTATGATGGGCCAGTTAATGGATCTGAGAAGACAGTAGATAGAGCCAAAAAACGATGTTCCGACAGGGTTAAGAAGCTCCGAACAAGCCATATCTAA 1689 0.4168 MLASTVLTSPKLNLSGFFPPHASNSIAEISPRTPRSRVAIFGKSNSKIAVVARVSSNGRDGAVDATSQHSSPPSDIDAAENTSSGFGDGYVALFVRMLGLDHDPLDREQAIVALWKYSLGGKKCIDTIMQFPGCINLVVNLLRSESSSACEAAAGLLRSLSSVNLYRNSVADSGAIEEINRLLRHSSLGPEVKEQSMSTIWNLSVDEKLRIRISESDILLLSIKYLDDEDMKVKEAAGGILVNLALSCVNHNAMVEAGVIPKLAKFLTSNLEGSKVIKQEARNALLELAKDDYYRILVIEEGLVPVPLIGAAAYKSFTPGLHVWPTLPDGTEIERTSRQPSRFGASELLLGLNIDVKNANIEEAKINAIVGRTQQQFLARIGAMEMEEKTVSHYECSIDQRLTLLPWMDGVARLVLMLELEDKSAIIRAAESIAGSCINEHMCIAFKEAGAIKHLVRLLNCDHNAVQLAVTQALERLSVSNVVCWVIEGEGALGPLVSILKCSEITGPVVDKSLNILARILDPTKEMQMKFYDGPVNGSEKTVDRAKKRCSDRVKKLRTSHI* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2003 562 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 133 175 IPR000225 GO:0005515
Dod02g2003 562 SUPERFAMILY ARM repeat 71 522 IPR016024 -
Dod02g2003 562 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 28 551 - -
Dod02g2003 562 MobiDBLite consensus disorder prediction 59 79 - -
Dod02g2003 562 Gene3D - 411 533 IPR011989 -
Dod02g2003 562 Gene3D - 78 316 IPR011989 -
Dod02g2003 562 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 174 207 IPR000225 GO:0005515
Dod02g2003 562 SMART arm_5 439 479 IPR000225 GO:0005515
Dod02g2003 562 SMART arm_5 206 246 IPR000225 GO:0005515
Dod02g2003 562 SMART arm_5 247 290 IPR000225 GO:0005515
Dod02g2003 562 SMART arm_5 163 205 IPR000225 GO:0005515
Dod02g2003 562 SMART arm_5 121 162 IPR000225 GO:0005515
Dod02g2003 562 MobiDBLite consensus disorder prediction 60 79 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2003 89 319 U-box Gene Family AT2G23140 30.342 5.74e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2003 - - lang:109360684 837.41