LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod02g1990	ATGACCTTTACTCGAAATAATTATGTGAGTTCACTTCTATATGCTTCGATCGACTATCCTCCATTGCACCATTTGCCACCAATCCAAGCGTACCCTAAATTGCGGGTGTCCCCGCGAAAGTGTCCTGCTGCTAACAATCGGTGCCGTCTGCTTACTTCCCCCGACGAGTGCCCAATGTCTGCTTTCAACTCTCTCAGATCGTCCAAGCTTGTATCATGGAAACCAACCGGCAGGCTTCAGCAAACCCTAGCTAGTTGCGTAGAGCGGCGGGGAAAGGCTTTACATTCCGGAGAGGTTTCGACGGTGAGATTGTGCCCGGGGCTTGCCGGCGAAGGGAGGTACATTGATTTTCGGTCGAATTTGATTCCGGCTTCCGTCGATTTTGCACAGGTGTCGCCTCTCTGCACCACCTTGTGTAAAAATGGTTTCAGAATTCGAACCGTGGAGCACTTGCTTTCTGCGCTGGAGGCTGCTGGTGTTGATAATTGCAGAATTGAGATAGAGAGTTCGGATCCTGAAGGGCACGATGCCGAGATTCCTATATTTGATGGGTCAGCAAGGGAATGGACGGCAGCAGTGGAGGAAGTTGGTTTAAAGGTGGCAACAAATCATTATGGAAAAAACTTTGAAAAAATGGCAGCACATGTCAATGAACCAGTGTATGTTTGGAGGAATGATTCTTTTGCTGCAGCATTCCCTTCAGGAGTGGTTCAAATAAGTTATGGCATCAACTTCCCACAGGCACCTGCAATTGGCTCCCAGTGGTTTTCTACCACCCCTTTGGACAACTCTGTTTATTCCACGCAGATAGCTTTGTCAAGAACCTTCTGTATTTATGAGGAGGTCGAGCAAATGCGCAATGCTGGACTTATCAAAGGGGGCTCCCTAGAAAATGCCATTGTATGTAGTTGCAGTGAAGGTTGGTTGAATCCGCCACTACATTTCAATAATGAACCATGTCGTCACAAGGTCTTAGATCTAATTGGTGATCTTTCGCTTTTTGCTCAGCTTGGGAATCAAGGACTCCCAGTGGCACACATTGCAGCTTACAAGGGTGGCCATGCTTTGCATGCTGATTTGGCTCGCCGCCTAATGGGAATGATTTGA	1107	0.4779	MTFTRNNYVSSLLYASIDYPPLHHLPPIQAYPKLRVSPRKCPAANNRCRLLTSPDECPMSAFNSLRSSKLVSWKPTGRLQQTLASCVERRGKALHSGEVSTVRLCPGLAGEGRYIDFRSNLIPASVDFAQVSPLCTTLCKNGFRIRTVEHLLSALEAAGVDNCRIEIESSDPEGHDAEIPIFDGSAREWTAAVEEVGLKVATNHYGKNFEKMAAHVNEPVYVWRNDSFAAAFPSGVVQISYGINFPQAPAIGSQWFSTTPLDNSVYSTQIALSRTFCIYEEVEQMRNAGLIKGGSLENAIVCSCSEGWLNPPLHFNNEPCRHKVLDLIGDLSLFAQLGNQGLPVAHIAAYKGGHALHADLARRLMGMI*	369

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod02g1990	368	SUPERFAMILY	Ribosomal protein S5 domain 2-like	79	199	IPR020568	-
	Dod02g1990	368	Gene3D	lpxc deacetylase, domain 2	214	368	IPR011334	GO:0008759\|GO:0009245
	Dod02g1990	368	PANTHER	UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED	60	366	IPR004463	GO:0008759\|GO:0009245
	Dod02g1990	368	TIGRFAM	lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	80	364	IPR004463	GO:0008759\|GO:0009245
	Dod02g1990	368	Pfam	UDP-3-O-acyl N-acetylglycosamine deacetylase	80	365	IPR004463	GO:0008759\|GO:0009245
	Dod02g1990	368	Gene3D	lpxc deacetylase, domain 1	78	204	IPR015870	GO:0008759\|GO:0009245
	Dod02g1990	368	SUPERFAMILY	Ribosomal protein S5 domain 2-like	218	365	IPR020568	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod02g1990	62	364	Carbohydrate Esterase	AT1G25054	64.356	7.48e-146	414

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod02g1990	K02535		-	gmx:100814465	530.406