Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1987 ATGCAAGATGCAAAGGCTAGTGCTGATACCCCTGGGGCAGAAAATGGCATCCTTGAGGCTGGAGACAAGCCTGTGCGAATGGATACTGATACCAAGGCTCCAAAGAAAAAGGTTAAGAAAACAAATATCCCCGTAGCAGAGGCTCTTGTTTTGCTTAACTGCGAGTTGACGTTTGGGAATGGCGAAGACTTCAACCCAAGGAATGGGAGATGGAATTTTAGTAATAAGAAATTTGTGCAGCCAACAAAGGTAGAACAATGGGCTTTAGTTAACTTTTCTGCACACTGTGATGTAAAAGGGCTTGTGAGGGATTTGATTAGAGTTGCAGGAACAAAGGGAATTCTGATGGAAGATATCCAGTCTAAACTTCCTGGTGTTCCTCAGTTCCTTCTGTGTCTGATTCTTGAGCACAAAAACTGTGAAATTTATGGTCCATGGAAAAAGAAGAATCTTGCTGACTATGGAATCGTTAATCAGTGCATGTGTCCTTTAAGGGTCAATGACCAATTTCTGACTTACATGTTGATGAAGATCAATGCCAAGCTTGGTGGATTGAATACATTGTTAGGTGTTGAACATTCTCTTGCTCTTCCTGTTATTTCAAAAGCACCCACGCATATACTTGGCATGGATGTTTCCCATGGTTCACCAGGGCAGTCTGATATTCCTTCAATTGCAGTGGTGGTCAGCTCAAGACAGTGGCCTCTGATATCAAAGTATAGGGCCTATGTTCGTACCAGTTGGCAAAGGTTGAAATAA 759 0.4242 MQDAKASADTPGAENGILEAGDKPVRMDTDTKAPKKKVKKTNIPVAEALVLLNCELTFGNGEDFNPRNGRWNFSNKKFVQPTKVEQWALVNFSAHCDVKGLVRDLIRVAGTKGILMEDIQSKLPGVPQFLLCLILEHKNCEIYGPWKKKNLADYGIVNQCMCPLRVNDQFLTYMLMKINAKLGGLNTLLGVEHSLALPVISKAPTHILGMDVSHGSPGQSDIPSIAVVVSSRQWPLISKYRAYVRTSWQRLK* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1987 252 Gene3D - 50 119 - -
Dod02g1987 252 ProSiteProfiles Piwi domain profile. 130 231 IPR003165 GO:0003676
Dod02g1987 252 Gene3D - 196 252 IPR036397 GO:0003676
Dod02g1987 252 Gene3D - 120 193 - -
Dod02g1987 252 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 116 247 - -
Dod02g1987 252 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 46 117 - -
Dod02g1987 252 SUPERFAMILY Ribonuclease H-like 119 243 IPR012337 -
Dod02g1987 252 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 116 247 - -
Dod02g1987 252 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 46 117 - -
Dod02g1987 252 Pfam Mid domain of argonaute 65 117 IPR032473 -
Dod02g1987 252 Pfam Piwi domain 131 247 IPR003165 GO:0003676
Dod02g1987 252 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1987 Dod-Chr2 33663774 33680721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1987 59 250 Eukaryotic Initiation Factors Gene Family AT5G43810 30.180 3.63e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1987 K11593 - gmx:100820376 309.686