Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1986 ATGTCATCACAAACCACCGCCACGGAGTTGCCGGAGCCCCACGCGCCGCTCCTCCGCTCCCGCCATGTTAACTCCGATGCCTCCACCGCGGCCAGGGCGCCCACCCTCGCCCTCCTCCTGGGCCGCGCAGCCGGCCGCCGAGGCCCGTCCATGCTGGTCCGGGAGACGGCGGCGCGAGAGCTGGAGGAGCGGCGCGCTGACTGGGGCTACTCGAAGCCGGTGGTGGCACTCGACATGTCGTGGAACATGGCCTTCGTGGTGGTCTCGGCGGTGATGCTGGCGTGCACCTTGGACGAGCGGCCGAACACGCCGATCCGCGTGTGGATCGTCGGGTACGCGCTCCAGTGCCTGGTGCACGTGGTACTGGTTTGGCTCGAGTACCGGCGCCGGAGCCAAAGGAATTCGCGGCGGCCGAGCGAGGCCGGTACCCTTGAGGAACCCAACGACAGCGAGGACGAGGATGTCGGTGATGGCAGCTTCGGGAATTCGTCTCGCTCTGGATTTGCAAAACGATGTGAATCCTTTAATACTGGGGTTTCATTCCTTTGGTGGATAGTGGGCTTTTATTGGGTTGTCTCTGGTGGTGATATGCTCCTGCAAGATGCCCCGCGTTTATATTGGTTGGCTGTTGTCTTTCTGGCATTTGACGTCTTCTTTGCCATCTTTTGTGTTATTTTGGCATGCTTGATTGGTGTTGCTCTCTGTTGTTGTTTGCCCTGCATTATTGCTATTCTCTATGCTATTGCAGGACAGGAAGGTGCATCAGAAGCAGATCTTAATATAATTCCAAAGTACAGATTTCGAATGTCAAGCAATGAGGAAAAGCCTAGTGGGGGAGCTGGAACAATGATTCCCATTGAAACCAGCAGTGGTTACTTGGCAAATGAACGTACACTTTTGCTTGAGGATGCGGAATGTTGCATATGCCTCTGTTCATATGAAGATGGAGCAGAGCTCCATGCTCTTCCTTGCAACCATCATTTTCATTCTACGTGCATAGTGAAATGGCTGAAGATGAACGCAACTTGTCCCCTTTGCAAGTATAATATTCTCAAGGGAAATGAACAGGTGTGA 1074 0.5466 MSSQTTATELPEPHAPLLRSRHVNSDASTAARAPTLALLLGRAAGRRGPSMLVRETAARELEERRADWGYSKPVVALDMSWNMAFVVVSAVMLACTLDERPNTPIRVWIVGYALQCLVHVVLVWLEYRRRSQRNSRRPSEAGTLEEPNDSEDEDVGDGSFGNSSRSGFAKRCESFNTGVSFLWWIVGFYWVVSGGDMLLQDAPRLYWLAVVFLAFDVFFAIFCVILACLIGVALCCCLPCIIAILYAIAGQEGASEADLNIIPKYRFRMSSNEEKPSGGAGTMIPIETSSGYLANERTLLLEDAECCICLCSYEDGAELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1986 357 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 10 357 - -
Dod02g1986 357 SUPERFAMILY RING/U-box 295 351 - -
Dod02g1986 357 SMART ring_2 306 346 IPR001841 -
Dod02g1986 357 CDD RING-H2_PA-TM-RING 305 347 - -
Dod02g1986 357 ProSiteProfiles Zinc finger RING-type profile. 306 347 IPR001841 -
Dod02g1986 357 Pfam Ring finger domain 305 347 IPR001841 -
Dod02g1986 357 PANTHER TARGET OF ERK KINASE MPK-1 10 357 - -
Dod02g1986 357 MobiDBLite consensus disorder prediction 136 159 - -
Dod02g1986 357 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 288 352 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1986 Dod-Chr2 33500247 33516583 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1986 12 356 C3H Transcription Factor Family AT1G68070 68.786 8.42e-176 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1986 - K13148 aip:107643865 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1986 02 33500247 33516583 Dod02g1986 02 33500247 33516583 ECH