Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1953 ATGGAGGCCCAACCTCCACCCCAACCCACTGCTCCAGCGCAGTCCTCCGTCCACCCGCCACCCCCACCTCCCCACTTCAACTACCCAGACTCCGTCGACTCCTCCCCTCGCTCTCGCCTCACAGACTCCTGGGACGAACCCTACCCTCCTCCCCAAACCACCACCACCAAGCTCCGTCTCATGGTCAGCTACGGCGGCCACATCGCTCCCCGCCCCCACGACAAGACCCTTTCCTACCTCGGCGGCGACACACGCATCGTCGTCGTCGACCGCCACACCTCGCTCTCGGAGCTCTCCACGCGCCTCTCCAAAACCTTCCTCAACGGCGGCCCGTTCGTCCTTAAATACCAGCTCCCCAGCGAGGACCTCGACTCCCTAATCTCCGTCACCACCGACGAAGACCTCGACAACATGATCGACGAGTACGACCGAACTGCCAACGCCAACAATTCCTCTTCCTCATCAAAACCCTTACGAATCCGCCTCTTTCTTTTCCCCGATAAGCCCGACTCGGCCCAGCACATCGGGCCCGACGCCTCGGGCTTGGGCTCGGGGAAGTCCGACGATTGGTTCCTCAACGCTCTGAACGGCTCCGCCGGCATGTCCGACGGTGGCTTATCGGACTCCGCATCTGTGAATTGCCTTCTGGGAGTCGACGATGAGGTTGTCGCAGGGAATAACAACCCCAACCACGGATCGGGTCCTGGAGTTTCCGCTGCGGCACAGGGTGGGAGTGTCAAGAATTCGAAGCAGCAGGGGCAGGATGTTCATTCGGTGCCGGATTCGCCTATGATGGAGACGAATTCGTCTTTCGGGTCTACTTCGTCGTCGCCATCGGTTGTGGCAAATTTACCGCCGATAAGGGTTCATGCGGATGATGGCGGCAGTGGCGGTGGTGGAGTGAGGGCGCAGGATCAGAAGGTGGTGGGGATTGAGGAACAGTTTGCTCAATTAGGGGTTGGTGTTGTGGGACAGAAGCAAGACGAGGGCTTCGTTGTGCTTTCTTCGCCTCCTGCTGTGGCGGTCAATGTTTCGGCTGCGGCAGCAGTGGCGGGTGTGCCGATCAGCTCTGCGGCAGCTGTGGCCGGGGAATACCACAGCCGAGTTGTCTCCGATGATGAGAGATCGGACCACGGGGGTGCCCATGGGGCATAG 1155 0.6069 MEAQPPPQPTAPAQSSVHPPPPPPHFNYPDSVDSSPRSRLTDSWDEPYPPPQTTTTKLRLMVSYGGHIAPRPHDKTLSYLGGDTRIVVVDRHTSLSELSTRLSKTFLNGGPFVLKYQLPSEDLDSLISVTTDEDLDNMIDEYDRTANANNSSSSSKPLRIRLFLFPDKPDSAQHIGPDASGLGSGKSDDWFLNALNGSAGMSDGGLSDSASVNCLLGVDDEVVAGNNNPNHGSGPGVSAAAQGGSVKNSKQQGQDVHSVPDSPMMETNSSFGSTSSSPSVVANLPPIRVHADDGGSGGGGVRAQDQKVVGIEEQFAQLGVGVVGQKQDEGFVVLSSPPAVAVNVSAAAAVAGVPISSAAAVAGEYHSRVVSDDERSDHGGAHGA* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1953 384 Pfam PB1 domain 76 166 IPR000270 GO:0005515
Dod02g1953 384 ProSiteProfiles PB1 domain profile. 57 165 IPR000270 GO:0005515
Dod02g1953 384 PANTHER OS05G0427100 PROTEIN-RELATED 17 324 - -
Dod02g1953 384 CDD PB1_UP2 61 165 - -
Dod02g1953 384 PANTHER EXPRESSED PROTEIN 17 324 - -
Dod02g1953 384 MobiDBLite consensus disorder prediction 225 280 - -
Dod02g1953 384 Gene3D - 78 165 - -
Dod02g1953 384 SUPERFAMILY CAD & PB1 domains 73 174 - -
Dod02g1953 384 MobiDBLite consensus disorder prediction 1 54 - -
Dod02g1953 384 SMART PB1_new 72 165 IPR000270 GO:0005515
Dod02g1953 384 MobiDBLite consensus disorder prediction 242 280 - -
Dod02g1953 384 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1953 Dod-Chr2 30414964 30416118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1953 57 230 MAP Kinase Kinase Kinase AT3G46920 36.207 4.34e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1953 - - zju:107409866 417.927