Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1949 ATGCCCTATCCTTACATACTCTCATCCTCGTTTGCACAATTTTCTTCCCCTCTTCCACTCCTGCCATTTCTCTCCCATGCCCTCTTCCTCATTTCATCTCAGATGAAAGGAACTCCCTTCGCCACCCTCCTCAAGTCCTTTTGTTATGCCGTTTTTCAGCCACACATCATCATCTTCTCTGTTCTAACCAGAGTAGCTTTGTCTTCCGTGGATCCAAAGTTCGAAGCTTGCGTGCCAGTGACATGTGGTAATGGCCAAACCATAAGCTACCCGTTCTATATCCTAGGGAAACAAGAACCCTTCTGTGGGAATCCAGGATTTGAGCTGAGCTGTGTGAAGAATGGCTTCCCAATCCTCGATCTCATCAACACCACATACGTCATCCAAGATATTTTCTACAACAACCAATCCATTCGTGTGTCTAACCCTGCCTTTTCCGGACAAACCACGTCTGAATGCATTGCTCCCGCACAGAACCTCACGGTTGGCAAGTACAGGTTCTACGTTGCTCCCAAACAGAGGGACCTGTTCTTGTTCTACGAATGCGACTTAGCATCGATTCCTCAAGGGATCGTTCAAGAGCATAGAATCGGGTGCTCTGAAGAAAACAAAACGAGTTCGGTATTGGGCTTTTATGCGGAGGATCCCAATTCAAGCTGGGCGAAGGGGAAGTGCAAGGGTGGGGTAGTGAACGCAACGGTGGAAGATGGTGAGGGACGGATTCAAGAGGCACTTAGAAAAGGGTTTGTGCTGAATTGGAATGCAGGTAATTGCAGCACGTGCTCGAGCAGTGGGGGAAGGTGCGGGTTCGATCTAGACCCACATATATACGCTTTCAGGTGCTTCTGCCCTGATAGAGTTCATGCTGTGGAATGTGTTCTTCCAACAGGACAACAATCAGAGGCAAACAGGAGCAAGGCAAGGAAAGTAGGCATAGGTTTAGGTGTTGGATTCCTAGGCATGTTGATAATTGGGTTGCTCCTTGTACTCTACAAAAGAAAACGTGGTTATTCAGGTGGTCAATCCCAAACAAGAAACACTTATTTTGATCCCTCCTCAAATCCAGATGTAGAAAGTGGAAATGTGTACTTTGGAATCCCCCTCTTCTCCTACAAGGAGCTTGAAGAAGCAACAAGCCATTTCCACCTTAATAAACAAATTGGAGATGGAGGCTTTGGGACCGTCTACTATGGGAAACTCCAAGATGGACGGGAAGTTGCTGTCAAACGCTTATACGAGCACAACTACAGGCGAGTGGAGCAGTTCATGAATGAAGTGCAGATCCTGACGCGTTTGCGCCACAGATATCTTGTGTCCCTCTATGGCTGCACTTCACGCCAGAGCCGTGAACTACTGCTTGTGTATGAGTACATTCCAAATGGCACCGTTGCTTCTCATATTCATGGTGAATTAGCAAAGCCTGGTTTACTACCATGGTCTACAAGAATTAAAATTGCCATAGAGACCGCTAGTGCATTGACTTATCTCCATGCTTCTGACATCATTCACCGTGACGTGAAAACCAACAACATTCTCCTTGACTACTGCTTTTCTGTTAAAGTTGCAGATTTTGGTCTTTCGAGACTATTCCCCACTGATGTTACCCATGTCTCTACAGCACCACAAGGGACTCCGGGTTATGTTGACCCAGAGTATTACCAGTGCTATCAGCTTACAAGCAAGAGTGATGTATATAGCTTTGGGGTTGTGCTCATTGAGCTAATATCATCTAAGCCAGCTGTTGACATGAACAGGGACAAGGATGAGATTAACTTATCAAGTCTAGCCATAAAGAAGATTCAAGAAAGTGCACTTAGTGAGCTGGTTGATCCTTCTCTTGGTTTTGATTCAGACAATGAGATTAAGAGGATGGTAGTTTCAGTGGCAGAATTGGCTTTTCAGTGTCTGCAACGGGACAAGGAATTGAGACCTTCCATGGATAAAGTCTTGGAGGTGCTGAGGAGAATTGAGAGTGAGAAGGATGAGCCAGAGCATCGAGAGGAAGCAGATTTTCATGCTGCTGGGGTTTCTCAAAGTAACGTTCATCAACCACCTCCACCAACTTCACCAGAATGGGATGAAGTTGGGCTATTGAAGAACGTGAAGCCCCCTTCTTCGCCAATAACAGTTACTGACAGCTGGGAAAGTAAATCCACTACGCCTAATGTCAGTGGTTAA 2178 0.4601 MPYPYILSSSFAQFSSPLPLLPFLSHALFLISSQMKGTPFATLLKSFCYAVFQPHIIIFSVLTRVALSSVDPKFEACVPVTCGNGQTISYPFYILGKQEPFCGNPGFELSCVKNGFPILDLINTTYVIQDIFYNNQSIRVSNPAFSGQTTSECIAPAQNLTVGKYRFYVAPKQRDLFLFYECDLASIPQGIVQEHRIGCSEENKTSSVLGFYAEDPNSSWAKGKCKGGVVNATVEDGEGRIQEALRKGFVLNWNAGNCSTCSSSGGRCGFDLDPHIYAFRCFCPDRVHAVECVLPTGQQSEANRSKARKVGIGLGVGFLGMLIIGLLLVLYKRKRGYSGGQSQTRNTYFDPSSNPDVESGNVYFGIPLFSYKELEEATSHFHLNKQIGDGGFGTVYYGKLQDGREVAVKRLYEHNYRRVEQFMNEVQILTRLRHRYLVSLYGCTSRQSRELLLVYEYIPNGTVASHIHGELAKPGLLPWSTRIKIAIETASALTYLHASDIIHRDVKTNNILLDYCFSVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPEYYQCYQLTSKSDVYSFGVVLIELISSKPAVDMNRDKDEINLSSLAIKKIQESALSELVDPSLGFDSDNEIKRMVVSVAELAFQCLQRDKELRPSMDKVLEVLRRIESEKDEPEHREEADFHAAGVSQSNVHQPPPPTSPEWDEVGLLKNVKPPSSPITVTDSWESKSTTPNVSG* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1949 725 Pfam Wall-associated receptor kinase galacturonan-binding 77 141 IPR025287 GO:0030247
Dod02g1949 725 Gene3D Phosphorylase Kinase; domain 1 354 457 - -
Dod02g1949 725 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 70 724 - -
Dod02g1949 725 Pfam Protein kinase domain 381 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1949 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Dod02g1949 725 SUPERFAMILY Protein kinase-like (PK-like) 362 664 IPR011009 -
Dod02g1949 725 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Dod02g1949 725 Pfam Wall-associated receptor kinase C-terminal 222 285 IPR032872 -
Dod02g1949 725 CDD STKc_IRAK 387 656 - -
Dod02g1949 725 SMART serkin_6 381 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1949 725 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 70 724 IPR044652 -
Dod02g1949 725 MobiDBLite consensus disorder prediction 704 725 - -
Dod02g1949 725 Gene3D Transferase(Phosphotransferase) domain 1 458 671 - -
Dod02g1949 725 MobiDBLite consensus disorder prediction 659 725 - -
Dod02g1949 725 ProSiteProfiles Protein kinase domain profile. 381 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1949 Dod-Chr2 30089943 30097974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1949 256 725 Receptor kinase-like Gene Family AT1G25390 56.184 9.56e-176 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dod02g1949 Pkinase 6.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1949 - - aip:107643858 983.4