Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1948 ATGTGTTTCGCCTCCTTCATTGTGATATTTTGGATGGCTGCCGACCGCCGTCTGCTTGGTTTCCCAATTCTTCTCTGCTATTTTTCGCTTCTTCACTCGGCTGCCAATGGGACAGGATATCCGATCAAGTGCCCTGAGCCTTTCAACTGTGGAAAGCTCGGGTCCGTTGGGTTCCCTTTCACCGATGACATGAGATCATGTGGCCTGCCCATAAGTGGTTGTCACGCAGACGCAGAAGTCCACCTTGGAAATCAGACATACAAAATTGAAAGCATCATTCAGGAGTACCATTCAATTTTCGTCCACGAGACCTTTGCCACTATAAATTTATGGGAGTTTCGTGACATGATGTCTTTTCATGTCGTGAACCGTGTTGCCTTCTTCAGATGCATTCATCAATTCAAATTCAATGTCGACAAACCTCCTACAGACGCATTCCACTACAATAGAAGCTGTCCACACTACGATATCTACGTCAGTTCTGATCATTCTTTTCCTCCACAAAGAATGAATAAGTTCCCCAGCTTGTCAAATGCGTGTTCACCGGATCCAAGCGTACAACTGCCCAATTTCACTAACCCGTGCACACTCATAAGTTCTTTTGTTGAAATTGAAGTAACATTATCGAAGTCATGCAATTATTATTGTCGAAAAGGCTACTACGACCCTGATAATTATGGAATTGAACCACAACCTAATGAATATGCTGCTTCTGATGCTCCATCTCCAGGTTCTACAGGCGCTACCAGACGGGATTCGAAGGCTCCAGTAATAGGTTTATCTGTCGGATTGGCAGCAATGACTGTAATTGCCTTGTGCCTGTTTTGTGCCATTCTTTCACTGTACAAACGCAGAAACAGTTCTTCAGACTATCAAAACAAAGCTAGAAATATATATTCTAGTTCCAACTCAAACACAAGACTAGAAAGCAGGACTGTGTACTTTGGGATCCCCGTCTTCCCCTATGAGGAGCTCCAAGAGGCAACAGACAATTTTGATCAAGCTAGAGTGCTTGGAGAAGGAGGCTTCGGGACTGTTTACTATGGAAAGCTTCGAGATGGACGGGAAGTTGCTGTGAAGCGCCTGTACGAGCGTAACTACAGGCCAGTTGAATCCTTCATCAATGAAATCCAGATCCTTACACGCTTGCGCCACACGTATCTCTTGTCTCTCTATGGCTGCACTTCACGCCACAGTCGTGAGTTGCTTCTGGTGTATGAATACGTCCCAAATGGCACTGTAAGTTACCATCTCCATGGTGATAAATCGAAGTCTGGCTTGTTGCCATGGCATGTGAGAATGAGAATCGCCATTGAGACTGCTGATGCATTGGCTTATCTGCATGCTTCCGACATCATTCACCGAGATGTCAAGACTAGCAACATTCTCCTTGACAACAACTTCTCTGTTAAGGTTGCTGATTTTGGGCTTTCAAGACTGTTCCCCGAAGATGTCACGCATATCTCCACAGCTCCACGGGGAACCCCAGGTTATGTTGACCCAGACTATCGCCTATGCTACCAGCTTACAAGCAAGAGCGATGTATATAGCTTTGGAGTAGTTCTTGTTGAGCTAATATCGTCTTTGCCAGCAGTTGATATGAACAGGGATAGGGATGAGATTAAGTTGGCAAATCTAGCCTTAAAGAAGATTCAAACGGGGGCATTTTGTGAGCTTGTAGATCCTAATCTTGGTTTTCAGTCGGATGACAAATCAAGAAGGATGATGATTTCAGTGGCGAAATTGGCCTTTCAGTGTTTGCAAGGGGCCAAGGACATGAGACCTTCTATGTGTGAGGTACTGGAGGTGCTGCAGAGGATTGAAAGTGGCAAGGATGAGCCAGGGAATCTAGAGGGAATAGAAATTCATAGTGCTGATGTTTCACTTGGTAATTCAAATCCATTACCGCCAAACACTCTGATAAAGCCCAAGCGCCTACACCAAACACTGTGA 1953 0.4501 MCFASFIVIFWMAADRRLLGFPILLCYFSLLHSAANGTGYPIKCPEPFNCGKLGSVGFPFTDDMRSCGLPISGCHADAEVHLGNQTYKIESIIQEYHSIFVHETFATINLWEFRDMMSFHVVNRVAFFRCIHQFKFNVDKPPTDAFHYNRSCPHYDIYVSSDHSFPPQRMNKFPSLSNACSPDPSVQLPNFTNPCTLISSFVEIEVTLSKSCNYYCRKGYYDPDNYGIEPQPNEYAASDAPSPGSTGATRRDSKAPVIGLSVGLAAMTVIALCLFCAILSLYKRRNSSSDYQNKARNIYSSSNSNTRLESRTVYFGIPVFPYEELQEATDNFDQARVLGEGGFGTVYYGKLRDGREVAVKRLYERNYRPVESFINEIQILTRLRHTYLLSLYGCTSRHSRELLLVYEYVPNGTVSYHLHGDKSKSGLLPWHVRMRIAIETADALAYLHASDIIHRDVKTSNILLDNNFSVKVADFGLSRLFPEDVTHISTAPRGTPGYVDPDYRLCYQLTSKSDVYSFGVVLVELISSLPAVDMNRDRDEIKLANLALKKIQTGAFCELVDPNLGFQSDDKSRRMMISVAKLAFQCLQGAKDMRPSMCEVLEVLQRIESGKDEPGNLEGIEIHSADVSLGNSNPLPPNTLIKPKRLHQTL* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1948 650 Gene3D Phosphorylase Kinase; domain 1 302 408 - -
Dod02g1948 650 SMART serkin_6 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1948 650 MobiDBLite consensus disorder prediction 231 252 - -
Dod02g1948 650 SUPERFAMILY Protein kinase-like (PK-like) 314 607 IPR011009 -
Dod02g1948 650 MobiDBLite consensus disorder prediction 628 650 - -
Dod02g1948 650 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 41 628 IPR044652 -
Dod02g1948 650 ProSiteProfiles Protein kinase domain profile. 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1948 650 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 41 628 - -
Dod02g1948 650 Pfam Protein kinase domain 333 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1948 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Dod02g1948 650 Gene3D Transferase(Phosphotransferase) domain 1 409 613 - -
Dod02g1948 650 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1948 Dod-Chr2 29948676 29952616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1948 258 609 Receptor kinase-like Gene Family AT1G25390 61.299 8.40e-145 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dod02g1948 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1948 - - ahf:112802646 726.472