Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1947 ATGTTGGCAGTATCTTTGTTGTGTGATTGGTTCTCGAGCATAACTTTTGCTGTTCTCCTAGGTAGTGTCATCATCACAAGTTTGCAAAATATAGTAAGAACTGAAGGCTTTAGGGGAATGTACCGTGGCCTTTCACCAACAATACTGGCATTACTTCCAAACTGGGCAGTTTACTTCACTGTTTATGATAAACTAAAGGGCCTGCTTCGTTCACATGATGGTTGCAATGAACTCACAACTATTGGAAATATTGTAGCTGCTGCTGGTGCTGGGGCAGCAACTGCAATTTCTACAAACCCATTATGGGTTGTTAAGACAAGACTCCAAACTCAAGGAATGAGGCCAGATGTTGTTCCTTACAAAAGCATTCTTTCTGCTTTTGCAAGGATTAACCATGAGGAAGGTTTGCGAGGACTATATAGTGGCATTGTGCCTTCATTGGCTGGCATAAGTCATGTCGCTATTCAATTCCCAGCATATGAAAAGATCAAGTCATACATGGCAAAAAAAGATAATACAACGGTCGACAAGCTAAGTCCTGGGAATGTTGCCATTGCATCATCAATTTCAAAAGTAATTGCCTCTGTAATGACTTATCCGCACGAGGTGATACGATCGAGGCTGCAAGAGCAAGGCCAGGCCAAAAAAATTGGGGTCCAGTATGCAGGGGTTATCGATTGTACTAAGAAGGTTTTCCAAAAAGAAGGCATTCCCGGCTTTTATCGTGGCTGCGCAACCAATCTATTAAGAACAACTCCATCTGCTGTCATTACATTTACAAGTTATGAGATGATACACAGGTTTTTGCTGCGGGTTTTTCCTGAAAACAAGGGGTATCCGCAAGGCCGCCCAAAATCCGATGCACTTAACAGGCCCCAGTCGGAAGAGAGTAACGTCATTAGAAATGATGCTGATCGGGGGCAATCGCCATCTCAGTCTAACAAGAAAGCTTCATCAATTCCTCTGGGAAATAAAGAGCAGCTAACAAGACACTGA 996 0.4297 MLAVSLLCDWFSSITFAVLLGSVIITSLQNIVRTEGFRGMYRGLSPTILALLPNWAVYFTVYDKLKGLLRSHDGCNELTTIGNIVAAAGAGAATAISTNPLWVVKTRLQTQGMRPDVVPYKSILSAFARINHEEGLRGLYSGIVPSLAGISHVAIQFPAYEKIKSYMAKKDNTTVDKLSPGNVAIASSISKVIASVMTYPHEVIRSRLQEQGQAKKIGVQYAGVIDCTKKVFQKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLLRVFPENKGYPQGRPKSDALNRPQSEESNVIRNDADRGQSPSQSNKKASSIPLGNKEQLTRH* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1947 331 MobiDBLite consensus disorder prediction 287 331 - -
Dod02g1947 331 Gene3D Mitochondrial carrier domain 19 272 IPR023395 -
Dod02g1947 331 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 20 283 IPR044712 GO:0006862|GO:0055085
Dod02g1947 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 68 IPR018108 -
Dod02g1947 331 PANTHER BNAA09G28490D PROTEIN 20 283 - -
Dod02g1947 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 78 166 IPR018108 -
Dod02g1947 331 MobiDBLite consensus disorder prediction 279 331 - -
Dod02g1947 331 SUPERFAMILY Mitochondrial carrier 24 264 IPR023395 -
Dod02g1947 331 Pfam Mitochondrial carrier protein 178 270 IPR018108 -
Dod02g1947 331 Pfam Mitochondrial carrier protein 24 71 IPR018108 -
Dod02g1947 331 Pfam Mitochondrial carrier protein 78 170 IPR018108 -
Dod02g1947 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 178 268 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1947 Dod-Chr2 29913275 29917125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1947 21 325 Chloroplast and Mitochondria Gene Families AT1G25380 66.667 2.33e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1947 K15115 - gmx:100816376 520.005