Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1946 ATGGCTCCTCCACCCACTTTCCCCATTCTACACTTCACCATGTTCTCCTTAACCCTGTACTTCCTCTACTTCGTCGAAGCCTCCCAAACCCAAAACCCCGATCTCCAGCCCCTAATGTCGTTCAAGACCGCTTCCGACACGCACAAAATGCTCAAAACATGGAACTCCAGCACCGACCCATGCACCTGGGACGGCGTCTCGTGCCTCAGGAACCGCGTCTCGCGCCTCGTCCTCGAAGACCTTGACCTCTGTGGCTCCATTCAGCCCCTAACCTCTCTCACCCAGCTCCGAGTCCTGAGCCTCAAAGGCAACCGTTTCAACGGCCCCATTCCCAGCCTCTCCAACCTCACCGCCCTCAGGCTCCTCTACCTCTCTCACAACAACTTCTCCGGCGACTTGCCGGCGACAGTTACGGCCCTCTCCCACCTCTACCGACTCGATCTGTCTTACAACAACCTCTCCGGCGAGATTCCGGCAACGGTCAACCGCTTGACCCACCTCCTCACCCTGCGACTCGATGGCAACCGAATCCGCGGACACATTCCCAACATCAACATCTCCAACTTACAAGACTTCAACGTCTCCGGTAACGAACTCTCGGGTCAAGTACCCGAGTCACTCTCGTGTTTCCCCGGATCCTCATTTGCGCAAAACCCGTCCCTCTGCGGTGCCCCATTGCAGAAATGTAAAGACATCCCTGCCCTCGCTTCCCCGTTGGCGCACCGTAACAGCACTCCAACAGCAACCATTCCGTCTACCCCTGAAAACGGAGCTCCGAGAATGGGGCCGGTGGTTTTAGTCGCAATTGTCGTCGGCGATGTTTTGGTGCTCGCCGTGGTTTCCCTGCTTCTTTACTGCTACTTCTGGCGAAACTATGGGGCGGCGTTGAGGGGGAGAAAGGGAGGGTCGAGTTCGAAGGCTCTGGAAGACGAGAAGGTGGTTCATTCGGCGAGTCCTTACGGGGCGCAGGCGGGGTTCGAGAAGGGCCGGATGGTGTTCTTTGAACGAGGGAAGAGGTTTGAGCTGGAGGAGTTGCTGCGTGCCTCCGCGGAGATGCTGGGGAAGGGTGGGTTCGGCACGGCGTACAAGGCTGTGCTTGATGATGGCAGTGTTGTGGCCGTGAAGAGGCTCAAGAATGTTCAGATTGGAGGGAAGAGGGAGTTCGAGCAGCAGATGGAAGTGCTGGGAAGGTTGAGGCACCCAAACGTTGTTAGCTTGAGGGCTTACTATTTTGCCAGAGATGAGAAGCTGCTTGTTTCCGATTACATGCCCAATGGTAGCCTGTTCTGGCTCCTCCACGGTAACCGAGGACCCGGGCGAATCCCGCTGGACTGGACCACGAGGCTCAAAATAGCAGCAGGAGCGGCACGAGGCGTGGCATTTATTCATGACAGCTCATGCAAGTCCCATCAGCTCACCCATGGTAACATCAAATCGACCAACATCCTCGTTGACGTGGCCGGCAATGCACGCGTGGCAGATTTTGGACTGTCCATATTTTCGGGGCCATCAAACGGAAGATCCAACGGCTACTGCGCTCCGGAGGCATCATCGGACGGTCGAACACAGTCCCAGAAGTCCGACGTGTACGCCTTTGGCGTTCTCTTGATGGAGATACTGACGGGGAAGTGCCCCTCCGCCGTAGACGGCGGCCTAGATGCGGTGGAACTGCCTAGGTGGGTCCAGTCGGTGGTGAGGGAGGAGTGGACGGCTGAGGTGTTTGATCTTGAGCTGATGAGGTACAAGGATATTGAAGAGGAGATGGTGGCGCTGCTCCAGATAGCTACAGCGTGCACTGCGGCCGCACCTGATCAACGGCCCAGGATGAGCCACGTGGTCAAGATGGTGGAAGATTTACGTGGGGTCGAGGTGTCACCTTGTCATGGCACGCTGGACGCGGCATCTGAGTCACCTTCTGCGTCTGAAGATGCATGTGGGTTTGGGGTGTTTCATATTAAGTAG 1962 0.5683 MAPPPTFPILHFTMFSLTLYFLYFVEASQTQNPDLQPLMSFKTASDTHKMLKTWNSSTDPCTWDGVSCLRNRVSRLVLEDLDLCGSIQPLTSLTQLRVLSLKGNRFNGPIPSLSNLTALRLLYLSHNNFSGDLPATVTALSHLYRLDLSYNNLSGEIPATVNRLTHLLTLRLDGNRIRGHIPNINISNLQDFNVSGNELSGQVPESLSCFPGSSFAQNPSLCGAPLQKCKDIPALASPLAHRNSTPTATIPSTPENGAPRMGPVVLVAIVVGDVLVLAVVSLLLYCYFWRNYGAALRGRKGGSSSKALEDEKVVHSASPYGAQAGFEKGRMVFFERGKRFELEELLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKNVQIGGKREFEQQMEVLGRLRHPNVVSLRAYYFARDEKLLVSDYMPNGSLFWLLHGNRGPGRIPLDWTTRLKIAAGAARGVAFIHDSSCKSHQLTHGNIKSTNILVDVAGNARVADFGLSIFSGPSNGRSNGYCAPEASSDGRTQSQKSDVYAFGVLLMEILTGKCPSAVDGGLDAVELPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVALLQIATACTAAAPDQRPRMSHVVKMVEDLRGVEVSPCHGTLDAASESPSASEDACGFGVFHIK* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1946 653 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 634 - -
Dod02g1946 653 ProSiteProfiles Protein kinase domain profile. 347 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1946 653 Gene3D Phosphorylase Kinase; domain 1 324 422 - -
Dod02g1946 653 SUPERFAMILY Protein kinase-like (PK-like) 351 616 IPR011009 -
Dod02g1946 653 Gene3D Ribonuclease Inhibitor 23 86 IPR032675 -
Dod02g1946 653 Gene3D Ribonuclease Inhibitor 87 232 IPR032675 -
Dod02g1946 653 PANTHER - 24 634 - -
Dod02g1946 653 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Dod02g1946 653 CDD STKc_IRAK 353 619 - -
Dod02g1946 653 Pfam Protein kinase domain 351 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1946 653 SUPERFAMILY L domain-like 49 226 - -
Dod02g1946 653 Gene3D Transferase(Phosphotransferase) domain 1 423 627 - -
Dod02g1946 653 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1946 Dod-Chr2 29858266 29861981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1946 34 646 Receptor kinase-like Gene Family AT1G68400 63.608 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod02g1946 Pkinase 6.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1946 - - adu:107467433 885.945